Triticum dicoccoides (wild emmer wheat): 119305958
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Entry
119305958 CDS
T07278
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119305958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119305958
03009 Ribosome biogenesis [BR:
tdc03009
]
119305958
04131 Membrane trafficking [BR:
tdc04131
]
119305958
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tdc04147
]
119305958
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
119305958
Ribosome biogenesis [BR:
tdc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
119305958
Membrane trafficking [BR:
tdc04131
]
SNARE
SNARE associated proteins
Others
119305958
Autophagy
Aggrephagy
Other aggrephagy associated proteins
119305958
Exosome [BR:
tdc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119305958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_33
AAA_16
AAA_2
AAA_5
AAA_14
AAA_22
TIP49
CDC48_2
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
AAA_18
Parvo_NS1
ABC_tran
ATPase_2
IstB_IS21
AAA_7
Viral_helicase1
NB-ARC
NACHT
ResIII
TsaE
Zeta_toxin
DUF815
AAA_24
Sigma54_activ_2
AAA_lid_PRS2_C
Vps4_C
SLFN-g3_helicase
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
119305958
NCBI-ProteinID:
XP_037438233
LinkDB
All DBs
Position
5B:complement(520448839..520451208)
Genome browser
AA seq
789 aa
AA seq
DB search
MASAAASKKAANRLVVEEAATNDDNSVCTLHPATMDKLSIFKGDIVLLKGKRRHSTVCMA
LPDDTCEGHKMRINKVARSNLRVRISDVVSVHQCHDVKYGKRVHILPLDDTIEGIGGNLF
DAYLKPYFVDAYRPVHKGDLFLVRGGMRSVEFKVIEMDPAVEYCIMAPDTEIFCEGEPVK
REDEERLDDVGYDDVGGMGKPLTLIRELVELPLRHPQIFKSIGVKPPKGILLYGPPGSGK
TLIARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP
NREKTHGEVERRIVSQLLTLMDGMKARAHVIVMGATNRPNSIDPALRRFGRFDREIDIAV
SDEVGRLEVLRIHTKNMKLDKDVNLEVVAKDTHGYVGADLAALCTEAALQCIREKMDVID
LEDDTIDAEILNSMAVTNDHLKTALIGTNPSALRETVVEVPNVNWNDIGGLDGVKRELQE
TVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMW
FGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGRVGDAGGAADRVLNQLLTEMDGM
NAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEASQHQIFKACLRKSPVAKDAD
LGALARFTAGFSGADITEICQRACKYAIREDIEKDIERQRMEKDTMEMDGGQEEEEVAEI
KAAHFEESMKYARRSVSDAAIRKYQAFAQTLQQSRGFGTEFRFPAQPQAAEAAVHTSTAA
DEDEDDLYK
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgcggcggcgtccaagaaggcggcgaaccgactggtggtggaggaggccgcc
accaacgacgacaactccgtgtgcaccctccaccccgccaccatggacaagctctccata
ttcaagggcgacatcgtgctgctcaagggcaagcgccgccacagcacggtctgcatggca
ctgcctgacgacacctgcgagggccacaagatgaggatcaacaaggtagcccggtccaac
ctgcgcgtgcgcatctccgacgtcgtgtcggtgcaccagtgccacgacgtcaagtacggc
aagcgcgtgcacatcctcccgttggacgacaccatcgagggcatcggggggaacctcttc
gacgcctacctcaaaccctacttcgtggacgcctaccgcccggtccacaagggcgacctc
ttcctcgtgcgtggtggcatgcggagcgtggagttcaaggtcatcgagatggaccctgcg
gtggagtactgcatcatggcgcccgacacggagatattctgcgagggcgagcctgtcaag
agggaggatgaggagaggctcgacgacgtcggctacgacgacgtgggtggcatggggaaa
ccgctgactctcatcagggagctcgtcgagctgccactcaggcatccgcagatcttcaag
agcattggcgtcaagcctcccaaaggcatcctcctctacggccctcccgggtccggcaag
acgttgatcgcccgtgcggtggcgaacgagaccggggccttcttcttccttatcaacggc
ccggagataatgtccaagatggctggagagagcgagagcaacctgaggaaggccttcgag
gaggccgagaagaacgcgccctccatcatcttcatcgacgagatcgactccattgcccct
aatagggagaagactcacggcgaggtcgagaggcgcatcgtctcccagctgctgacgctc
atggacggcatgaaggcacgcgcgcacgtcatcgtcatgggcgccacgaaccgtcccaac
agcatcgaccctgccttgaggcgcttcgggaggttcgatcgcgagatcgacatcgccgtg
tcggacgaggtcggccgcctcgaagtgctccgcatccacaccaaaaacatgaagctggac
aaggacgtcaaccttgaggtggttgccaaggatacgcacggctacgtcggcgccgacttg
gccgcgctctgcaccgaggcggcgttgcagtgcatcagggagaagatggacgtgatcgac
ttagaggacgacaccattgatgccgagatcttgaactccatggccgtcaccaatgaccac
cttaagacggctctcatcggcaccaacccgtccgcgcttcgtgagaccgtcgtcgaggtg
cctaacgtcaactggaacgatatcggcggcctcgacggcgtcaagagggagctgcaagag
accgtacagtacccggtcgagcacccagagaaatttgagaagttcggcatgtcgccgtcc
aagggcgtcctcttctacgggccaccgggatgtggcaagaccttgctggcgaaggcgatc
gccaacgagtgtcaggccaacttcatcagcatcaaggggccagagctgctcaccatgtgg
ttcggtgaaagtgaggccaacgtgcgtgaaatctttgacaaggcgcgccagtctgcgccg
tgcgtcttgttcttcgacgagcttgactccatcgcaacccagaggggaggcagggtgggg
gatgccggcggcgcggcggacagggtcttgaaccagctgctcaccgagatggacggcatg
aacgccaagaagacggtcttcatcatcggcgccaccaatagaccggacatcattgactcg
gcgttgctccgtcccggccgcctggaccagctcatctacatccccttgccggacgaggcc
tcgcaacaccagatcttcaaggcctgcctcaggaagtctcctgtggccaaggacgccgac
ctcggtgcgctggcaaggttcaccgccggctttagcggtgccgacatcacggagatctgc
caaagggcgtgcaagtacgccatcagggaggacattgaaaaggacatagagaggcagagg
atggaaaaagacaccatggagatggacggcgggcaggaagaggaggaggtagcagagatt
aaggcggctcacttcgaggaatcgatgaagtacgcgaggcggagcgtgagcgacgccgcc
atcaggaagtaccaggcattcgcgcagacgctgcagcagtctagggggttcggcaccgag
tttcgcttcccggcgcagccacaggcggcggaagctgctgtccacacctccacggcagct
gatgaggatgaagacgatctgtacaagtaa
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