Triticum dicoccoides (wild emmer wheat): 119306411
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Entry
119306411 CDS
T07278
Name
(RefSeq) cell division control protein 48 homolog E-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119306411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119306411
03009 Ribosome biogenesis [BR:
tdc03009
]
119306411
04131 Membrane trafficking [BR:
tdc04131
]
119306411
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tdc04147
]
119306411
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
119306411
Ribosome biogenesis [BR:
tdc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
119306411
Membrane trafficking [BR:
tdc04131
]
SNARE
SNARE associated proteins
Others
119306411
Autophagy
Aggrephagy
Other aggrephagy associated proteins
119306411
Exosome [BR:
tdc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119306411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
AAA_5
AAA_22
AAA_33
AAA_14
TIP49
CDC48_2
RNA_helicase
NPHP3_N
AAA_28
Parvo_NS1
nSTAND3
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ABC_tran
NACHT
ResIII
AAA_24
TsaE
AAA_lid_PRS2_C
Vps4_C
NB-ARC
Sigma54_activat
DUF815
Viral_helicase1
Zeta_toxin
SLFN-g3_helicase
KAP_NTPase
Motif
Other DBs
NCBI-GeneID:
119306411
NCBI-ProteinID:
XP_037438536
LinkDB
All DBs
Position
1B:441145487..441147889
Genome browser
AA seq
800 aa
AA seq
DB search
MASQGDASGNTDYSTAILERKKSPNRLVVDEATNDENSTIALHPDTMDSLELFHGDIVLL
KGKKRKDTVCILLPDGTCDKTKVRMNKVVRKNLRVRLGDVVSVHQCPDVKYGKRVHVLPV
DDTVQGIAGNLFDAFLRPYFLEAYRPLRKGDMFLVRGGMTSVEFKVVETDPAEYYIVASD
TEIFCDGEPVKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKCIGVKPPKG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNAPAI
IFIDEIDSIAPKRDKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDLALRRF
GRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVELEHVSRDTHGYVGADLAALCTEAAL
QCIREKMDVIDLEDDTIDAEILTSMAVTNDHFKIALGTSNPSALRETVVEVPNVSWEDVG
GLEGVKRELQETVQYPVEYPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGNSVGDAEGAADRV
LNQLLTKMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVESRLQIFRAC
LRKSPVAKDVDLNALAKYTQGFSGADIMEICQCACKYAIRENIEKDMEKERRLKENPEAM
EEDEVDEIKAAHFEESMRYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFADQLAAGAT
AATDPFASSTMAAEEDDLYS
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccagggcgacgctagcgggaacacggactactccacggcgatcctggagaga
aagaagtcgccgaaccggctggtggtcgacgaggcgaccaacgacgagaactccaccatc
gccctgcacccggacaccatggacagcctcgagctcttccacggcgacatcgtcctgctc
aagggcaagaagcggaaggacacggtctgcattctgctcccagacggcacgtgcgacaag
accaaggtccggatgaacaaggtcgtccggaagaacctgagggtccggctgggcgacgtc
gtctccgtccatcagtgcccggacgtcaaatacgggaagcgcgtccacgtactccccgtc
gacgacaccgtccaagggatcgccggaaacctgttcgatgccttcctgagaccctacttc
ctcgaggcctaccgtcccctcaggaaaggagacatgttcctggtgagaggcggcatgacg
agtgtggagttcaaggttgtggagaccgaccccgcggagtactacatcgtcgcgtctgac
acagagatattctgtgacggcgagcctgtcaagcgggaggatgaggagagactcgacgac
gtcggctacgacgatgtcggtggggtcaggaagcagatggcccagatcagagagctggtt
gagctcccactgcgccaccctcagctgttcaagtgcatcggtgtgaagcctccaaagggc
atcttgctgtatgggccacctgggaccggcaagaccctcattgccagagctgtggccaat
gaaacaggtgccttcttcttcctgatcaatggcccggagatcatgtcgaagatggccgga
gagagcgagagcaacctcaggaaggcgtttgaagaggccgagaagaatgcgccggccatc
atcttcatcgatgagatcgattccatagccccaaagagagacaagaccaacggagaagtc
gaaaggcgtatcgtctcacagctgctcactctcatggatgggctcaagtcccgggcacat
gttattgtcatgggggctaccaaccgcccaaacagcatcgaccttgctctcagaaggttt
gggaggtttgaccgggagatcgacattggagtccctgatgaagttgggcggcttgaggtt
ctccggattcacactaaaaacatgaagctagctgaagatgttgaactggagcatgtctcg
agggacactcatgggtatgtaggtgctgatctcgctgccctttgcaccgaggctgctctc
cagtgcattcgcgagaagatggatgtcatcgaccttgaggatgacaccattgatgcggag
atactgacttctatggctgtcaccaacgaccatttcaagattgcactaggaacaagcaac
ccttccgctcttcgcgaaactgtcgttgaagttccaaatgtctcttgggaagatgttggt
ggtctggagggtgtcaaaagggagctgcaggagaccgtccagtatccggtggagtaccca
gagaagtttgagaagtttggcatgtctccctccaaaggtgttctgttctacggccctccg
ggctgcggcaagaccttgttggccaaggcgattgctaacgagtgccaggctaacttcatt
agcatcaaaggaccggagctgcttaccatgtggtttggtgagagcgaggccaatgtgcgt
gagattttcgacaaggccagggggtcggcaccatgtgtcctcttcttcgatgagctcgac
tcgattgccacgcagagaggaaacagtgtaggcgatgccgaaggtgccgctgatagggtg
ctgaatcagcttctcaccaagatggacggaatgaatgccaaaaaaaccgtgttcatcatc
ggtgccaccaacaggccagacatcatagaccctgccttgctgaggccggggcgccttgat
cagcttatctacattcctctgcctgacgttgaatccaggctccagatcttcagggcctgc
ctcaggaagtctcctgtggccaaggatgtcgacctgaatgcgctcgccaaatacacacaa
gggttcagcggcgcggacatcatggaaatctgccagtgtgcgtgcaaatacgccatcaga
gagaacattgagaaggacatggaaaaggagaggcggctgaaggaaaaccctgaagccatg
gaggaagacgaggtggacgagatcaaggctgctcacttcgaggagagcatgaggtatgca
cgccggagtgtgagcgatgctgatattcgcaaataccaggcctttgctcagacgctgcag
cagtcccgtggtttcggcaccgagttccggttcgctgatcagctagcggcaggtgctacc
gcggcgacagatcctttcgcatcctctaccatggcagctgaagaggatgatctgtacagt
taa
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