Triticum dicoccoides (wild emmer wheat): 119306523
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Entry
119306523 CDS
T07278
Name
(RefSeq) polygalacturonase ADPG2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00040
Pentose and glucuronate interconversions
tdc01100
Metabolic pathways
Module
tdc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119306523
Enzymes [BR:
tdc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
119306523
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
119306523
NCBI-ProteinID:
XP_037438613
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Position
5B:complement(654909477..654910995)
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AA seq
410 aa
AA seq
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MASFMAAVLVLLLLASSARASEADPAPAETQQNVFIVDNYGARGDGKHDDAQPLAKAWNA
ACSSSRPAVLLVPEGKTYLLSSVTLSGPCKSSVVFMLKGTLVAPRSRSAWSQNDTSRWIL
IQGVTGLTVSGGGTINGNGDVWWANSCKVNKALPCTKAPTALTFHQCNNLQVENLKLVNS
QQIHLSVEDCSGVQLARLSITAPGTSPNTDGIHITRSKDVQVKDCVIKTGDDCVSIENGT
HNLFVSKVVCGPGHGISIGSLGDDNSRAEVSGITIDSVQLYGTTNGARIKTWQGGSGYAK
DITFQNMVMDNVQNPIIIDQNYCDSAKPCNRGQGSAVEVSNVVFKNIRGTTVSKDAIKLS
CSHSISCSDIVLENINLKMEGGKGDTESTCQNAKWQESGTVIPQPCQFQN
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgttcatggcggccgttctggtcctgctgctcttggcatccagtgcacgggcg
agcgaggccgacccggcgcccgctgagactcagcagaatgtcttcatcgtcgacaactac
ggtgcacgtggcgacgggaagcacgacgacgcgcagccgctcgccaaggcgtggaacgcg
gcgtgttcctcctcccggccggccgtgctgctcgttcccgagggcaagacctacctgctc
agctccgtcaccctctctggcccatgcaaatccagcgtcgtcttcatgctcaaaggcacg
ctggtcgctccacggagcaggtcggcgtggagccagaacgacacaagtcgctggatcctg
atccaaggcgtcaccggactcaccgtctccggtggcggcacgatcaacggcaacggcgac
gtctggtgggccaactcatgcaaggtcaacaaggctctgccgtgcaccaaggcgccgacg
gccctcacgtttcaccagtgcaacaatctgcaggtggagaaccttaagctagtaaacagc
cagcagatccatctctcggtcgaggactgcagcggcgtgcaactggcccgcctgtccatc
acggcgcccggcaccagccccaacaccgatggcatccacatcacccgcagcaaagatgtg
caagtcaaagattgcgtcatcaagaccggggacgactgcgtctccatcgagaatggaacc
cacaatctttttgtcagtaaagttgtttgtggtccggggcatggaattagcatcgggagc
ttaggagatgacaactccagagccgaggtctctggcatcacaatcgactcggtgcaacta
tacggcaccaccaatggtgcccggatcaagacatggcagggagggagcgggtacgccaag
gacatcacgttccagaacatggtcatggacaacgtgcaaaaccccataatcattgaccag
aactactgcgactccgccaagccatgcaatagaggtcagggatctgcggtggaggtcagc
aatgtcgtcttcaagaacattagagggacaaccgtctccaaggatgccatcaagctgagc
tgcagccatagcatctcatgctccgacattgtcttggagaatatcaacctgaaaatggaa
ggcggcaagggtgacacggaaagcacttgtcagaatgcaaaatggcaagaatcaggaacc
gttattccacaaccctgccaattccaaaactag
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