Triticum dicoccoides (wild emmer wheat): 119306565
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Entry
119306565 CDS
T07278
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00040
Pentose and glucuronate interconversions
tdc01100
Metabolic pathways
Module
tdc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119306565
Enzymes [BR:
tdc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
119306565
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Gene cluster
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
119306565
NCBI-ProteinID:
XP_037438645
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Position
5B:665715213..665717204
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AA seq
411 aa
AA seq
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MEARPPVLAIVVVALCVVSLCGGVAHGTAVTYNVKNYGAKGNGATDDTKALMAAWKVACA
AAGAVTLQVPAGVYYMGPAQFHGPCKASSLTFLLQASKHAPCSCVGGGTLKAATDLSRFG
NDWIEFGWVKGLIVAGQNGAAIDGQGAASWPFNKCPIRKDCKVLPTSVLFVNNENTVVKD
ISSVNSKFFHFALLQNKNTQMINLRINAPGTSPNTDGVHIERCSGVTIVDTKISTGDDCI
SIGQGNDNIDIQRVTCGPGHGMSVGSLGRYVGEGDVTRVHVKDMTFEGTMNGVRIKTWEN
SPTKSLAAHMVFESLVMKDVQNPVIIDQKYCPYYNCEHKYVSGVTIKNVTFKNIKGTSSL
PVAVLLRCGMPCQGVVLQDLDLKFKGAGTTSSKCENAKAKYVGYMYPKPCV
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcggccgccggtgttggccattgtcgtcgtcgcgctctgcgttgtatccctc
tgcggcggtgtggcccacggcacggcggtcacctacaacgtcaagaactacggcgctaaa
ggcaacggcgccaccgacgacaccaaggcgctaatggcggcgtggaaggtggcgtgcgcg
gcggccggcgcggtgacactgcaggtcccggcgggggtatactacatgggcccggcgcag
ttccacggcccctgcaaggcctcctccctcaccttcttgctccaggcaagcaagcatgca
ccatgcagttgtgttggcggcgggacgctgaaggcggcgacggatctgagccgcttcggc
aacgactggatcgagttcgggtgggtgaagggcctcatcgtcgccggccagaacggcgcc
gccatcgacggccagggcgccgcctcctggcccttcaacaagtgccccatccggaaggac
tgcaaggtcctccccaccagcgtgctgttcgtgaacaacgagaacacggtggtgaaggac
atctcgtcggtgaacagcaagttcttccacttcgcgctgctgcagaacaagaacacccag
atgatcaacctgcggatcaacgcaccggggaccagccccaacacggacggcgtccacatc
gagcgctgctccggggtgaccatcgtcgacaccaagatcagcaccggcgacgactgcatc
tccatcggccaggggaacgacaacatcgacatccagcgcgtgacctgcggaccgggccac
ggcatgagcgtgggcagcctggggcggtacgtcggggagggggacgtgacccgcgtgcac
gtcaaggacatgaccttcgagggcaccatgaacggggtgcggatcaagacgtgggagaac
tcgcccactaagagcctggcggcgcacatggtgttcgagagcctggtgatgaaggacgtg
cagaacccggtgatcatcgaccagaagtactgcccctactacaactgcgagcacaagtac
gtgtccggggtcaccatcaagaacgtcaccttcaagaacatcaagggcacctcgtcgctg
cccgtcgccgtgcttctccgctgcggcatgccgtgccagggcgtcgtgctccaggacctc
gacctcaagttcaagggcgccggcaccacatcgtccaagtgcgagaacgccaaggcaaag
tacgtcggctacatgtacccaaagccgtgcgtatag
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