Triticum dicoccoides (wild emmer wheat): 119306761
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Entry
119306761 CDS
T07278
Name
(RefSeq) pectate lyase 1-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00040
Pentose and glucuronate interconversions
tdc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119306761
Enzymes [BR:
tdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
119306761
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
119306761
NCBI-ProteinID:
XP_037438794
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Position
5B:complement(705049651..705050908)
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AA seq
371 aa
AA seq
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MAPKESLVSATLLFLLLRVATANQNVIDRCWRGQTNWANDRQRLAMCSVGFAGKMSHEVT
AYTVTDPSDDPVRPRPGTLRYGATLLPGKVWITFQPGNMHIRLAQPLFVKSFTAIDGRGA
DVHVAGGAGIVLYKVSNVVIHGLHVHDVRAQAPGQVVRPGGAVQNVDAGDGDAIRLLSSS
KVWIDHNTLSRCEDGLLDVTRGSTDVTVSNNWFHDHDKVMLLGHDDQHVADRRMRVTVAF
NRFGPNVNQRMPRIRHGYAHVVNNLYDGWRAYAIGGSMEPTVKSQGNLFIASTTDSPNVT
RRMPVGDAAGEDSHWHSTGDSFENGAVFKQTGNRVRPNYNGHQAFPAASSSEVRSLTKDA
GALRCSAGAAC
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggcacccaaggaatcactcgtgtccgccaccctcctcttccttctcctccgagttgcc
accgcgaaccagaacgtcatcgaccgctgctggcgcggccagaccaactgggccaacgac
cggcagcggctcgccatgtgctccgtcggcttcgccgggaagatgagccacgaggtgacc
gcgtacacggtcaccgacccgagcgacgaccccgtgcggccccggcccggcacgctgcgg
tacggcgcgacgctgctgccggggaaggtctggatcaccttccagccgggcaacatgcac
atcaggctggcgcagccgctcttcgtcaagagcttcaccgcgatcgacggccggggcgcc
gacgtgcacgtcgccgggggcgccggcatcgtgctctacaaggtgagcaacgtggtcatc
cacgggctccacgtgcacgacgtgcgcgcgcaggccccgggacaggtcgtccggcccggc
ggcgccgtgcagaacgtggacgccggcgacggcgacgccatccggctgctgtccagctcc
aaggtgtggatcgaccacaacacgctgtcgcgctgcgaggacggcctcctcgacgtgacg
cgcggctccacggacgtgaccgtttccaacaactggttccacgaccacgacaaggtcatg
ctgctgggccacgacgaccagcacgtcgccgaccgccggatgcgggtcaccgtggcgttc
aaccgcttcgggcccaacgtgaaccagcgcatgccgaggatacggcacggctacgcccac
gtcgtcaacaacttgtacgacgggtggagggcatacgccatcggaggaagcatggagccg
actgtcaagagccagggcaacctgttcatcgcctccacaacggacagccccaacgtgacg
agaaggatgccggtcggagatgcagccggagaggactcgcattggcactccaccggagac
tcgtttgagaacggcgccgtcttcaagcagacgggcaacagggtgcggccgaattacaac
gggcatcaggcgttcccggcggcgagctccagcgaggtgagatcgctgaccaaggacgcc
ggtgctctgaggtgctccgccggggccgcgtgctga
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