Triticum dicoccoides (wild emmer wheat): 119307107
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Entry
119307107 CDS
T07278
Name
(RefSeq) TATA-box-binding protein 2
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119307107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdc03000
]
119307107
03021 Transcription machinery [BR:
tdc03021
]
119307107
Transcription factors [BR:
tdc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
119307107
Transcription machinery [BR:
tdc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119307107
RNA polymerase III system
TFIIIB
119307107
RNA polymerase I system
SL1/TIF-1B
119307107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
119307107
NCBI-ProteinID:
XP_037439101
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All DBs
Position
5B:20216540..20220307
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AA seq
201 aa
AA seq
DB search
MAEAAALEGSEPVDLTKHPSGIIPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAA
VIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIV
ASCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMRQPKIVLLIFVSGKIVLTGAKVRE
ETYTAFENIYPVLTEFRKVQQ
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcggcggcgctggaggggagcgagccggtggatctgaccaagcacccctcc
ggcatcatccccacgctccagaatattgtgtcgacggtcaacctggactgtaagttggac
ctgaaagcaatagctctccaggcacgcaatgcagagtataaccccaagcgttttgctgca
gttatcatgcggataagagaaccaaaaactaccgcattgatatttgcttcaggaaaaatg
gtttgcactggagcaaaaagtgaacaacaatctaaactcgcagctagaaagtatgctcgt
ataatccagaagcttggatttcctgcaaaattcaaggacttcaagatccagaatattgtt
gcctcttgtgatgtcaaattccctatcaggcttgagggcctcgcatattcccatggcgct
ttctcgagttatgagccagagctatttcccggtctgatttaccggatgaggcagccgaag
attgtcctcctaatttttgtttctggcaagattgttctgactggagcaaaggtgagagaa
gagacatacaccgccttcgagaacatatatcctgtcctgacagagttcagaaaagtgcag
caatga
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