Triticum dicoccoides (wild emmer wheat): 119308147
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Entry
119308147 CDS
T07278
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 27-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdc03041
]
119308147
03009 Ribosome biogenesis [BR:
tdc03009
]
119308147
Enzymes [BR:
tdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119308147
Spliceosome [BR:
tdc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119308147
Ribosome biogenesis [BR:
tdc03009
]
Eukaryotic type
90S particles
Helicases
119308147
Pre-60S particles
119308147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
SecA_DEAD
Nic96
AAA_22
Motif
Other DBs
NCBI-GeneID:
119308147
NCBI-ProteinID:
XP_037440162
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All DBs
Position
5B:complement(224627730..224633917)
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AA seq
580 aa
AA seq
DB search
MGSAKSSKSSKKRKPVAPPPESDSEPEETVHETAAAEEFNQEEQPQPQQQSDAGDEHHEH
DKEVQETGKEKKKKKDKEGSGILTSMLFSELPISELTAKAIREMNYTHLAQIQARSIPHL
LEGRDVMGAAKTGSGKTLAFLIPAIELLYNLHFSSRNGTGVIVVCPTRELAIQTHNVAKE
LMKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYKRLKCLIID
EADRILEQNFEEDMKQIFKRLPQNRQTVLFSATQTKEVEDFAKLSFEKNEERKEKPVYIS
VDDGKSNATVEGLQQGYCVIPSDKRFLVLYAFLKKKQSKKVMVFFSSCSSVKFHAELLNF
LQIECEDIHGKQKQQKRTTTFFNFCKAEKGILLCTNVAARGLDIPDVDYIVQYDPPDEPK
DYIHRVGRTARGEKGKGSALLFLLPQELKFLIYLKAAKISLTEYEFNNKNVPNLQSHLEN
IVGENYFLNQSAKEAYRSYILAYNSHAMKDIFNVHDLDMKAVAASFCFKNPPKVNLDLES
SASKRRKTRKVDGGARRHGINAANPYGRKGGDDNMQCARF
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgggctccgccaagtcctccaaatcctccaagaagcggaaacctgtcgccccgccgcca
gagtcggactccgagccggaggagacggtccacgagaccgccgctgccgaggaattcaac
caagaggagcagccgcagccgcagcagcagtcggacgcaggagacgagcaccatgagcat
gacaaggaggtgcaggagacgggaaaggagaaaaagaagaagaaggacaaggagggctcg
ggaatcctcaccagcatgctcttctcggagctccccatctccgagctcaccgccaaggcc
atcagggagatgaactacacccacctcgcccagattcaagctcggtcgataccacatctg
ttggaaggaagagatgtgatgggagctgccaagactggctcagggaagacccttgcgttc
ctcataccggcgattgagctcctctataacctgcatttctcgtcgaggaatggcacagga
gttattgtggtttgccctacaagggagcttgccatacagacacacaatgttgccaaggaa
ttgatgaagtatcactcacaaaccctcggatatgtaattggtggtaatggccggagaact
gaagctgaccagcttgcaaagggggtcaatttgttagtagctacaccaggcaggctgttg
gaccatctgcaaaacaccaagggtttcatatataagagactaaagtgtcttataattgat
gaagctgatcgcattcttgagcagaactttgaggaagatatgaaacaaatatttaaacgc
cttccccagaatcggcagacagttcttttttctgcaacacaaactaaagaggttgaagat
tttgccaagttgtcatttgagaaaaacgaagaaaggaaagaaaaacctgtttatatctca
gttgatgatggtaaatcaaatgctaccgtggaaggcttacagcagggctattgtgtcatt
cctagcgacaagaggtttttggttctgtatgctttcctaaaaaagaaacagtctaagaag
gtcatggtgttcttttcatcatgtagctcagtaaagttccatgcagagcttctaaatttt
ctccagatagagtgtgaagatatccatgggaaacaaaaacagcagaaacgaactacaaca
ttctttaacttctgcaaggcagaaaagggcatcttattatgcactaatgtggcagcacgt
ggacttgatattcctgatgtggattatattgtgcaatatgaccctccagatgaaccaaag
gattacattcacagagttggtcgtactgcacgtggtgaaaaaggcaaaggaagcgcctta
ttgttcttgttgccgcaagaactgaagtttcttatttacctgaaggcagcgaagatttct
ctcacagaatacgagttcaataataagaatgtgccaaatttacaatcacaccttgagaac
atcgttggcgagaattacttcctaaaccagtcagctaaagaagcctacagatcctacatc
ttggcatacaactcacacgccatgaaggacatttttaatgttcatgatcttgatatgaag
gctgtagcagcgtcattctgttttaagaaccctccaaaagtgaacctcgacttggagagc
agcgcttctaaacgtcggaagacaaggaaagtggatggtggggcgaggaggcatggtatc
aatgccgcaaatccttatggacggaagggcggtgacgataacatgcaatgtgcaagattc
tag
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