Triticum dicoccoides (wild emmer wheat): 119308155
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Entry
119308155 CDS
T07278
Name
(RefSeq) tRNA pseudouridine synthase A-like
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tdc03016
]
119308155
Enzymes [BR:
tdc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
119308155
Transfer RNA biogenesis [BR:
tdc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
119308155
Prokaryotic type
119308155
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
119308155
NCBI-ProteinID:
XP_037440169
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All DBs
Position
5B:complement(226265800..226280188)
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AA seq
388 aa
AA seq
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MSAASSDSAEIATASKRPFDPSVADPSPPSKLQRFSQSDISPADADSGGEAGAESEAMAG
ARLSRTQRYLVAVEYDGTRFSGSQQQPNQRTVVGVLKEAFHKFIGQPVSIFCSSRTDAGV
HALSNVCHVDVERISKRKPGEVLSPHDPEVVKCAVNHFLHKNEGDIMVTDVRCVAPDFHA
RYKALERTYHYRLLSGPERPSIFEKNSAWHIPEDLNIQAMKKACNILVGHHDFSSFRAFG
CQAKSPVRTLDELTVTEVFPVMFFPSSLERSEMESPDGSLVYSRASLMGSSGERSDVSST
TSRKLVCENGQEFGKRLRHRCFVVTARAQSFLYHQVRLMVGLLKAVGIGDLTTADVERIL
DAKTMTAAPPMAPAYGLYLDNVKYDPIV
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgccagctcggactccgctgaaatcgccactgcctccaagcgcccgttcgat
ccctccgttgccgacccgtcaccgccttccaaactccagcggttctcccagtcagacatc
tcgccggcggacgcagacagcggcggagaggcgggcgccgaaagcgaggcgatggccggc
gcacggctctcccggacgcagcgatacctggtcgccgtggagtacgatggcacccgcttc
tccggttcccagcagcagccgaaccagcgcaccgtcgtaggcgtcctcaaggaggcattt
cacaaattcattgggcagccagtctcaatcttctgttctagtcgaacggatgcaggtgtt
catgctttgtcaaatgtttgtcatgttgatgtggagcgcataagtaaaaggaagcctggt
gaagtgttgtcacctcatgaccctgaagttgtaaaatgcgcggtgaaccattttttacat
aagaatgaaggtgacataatggtgactgatgttcgttgtgttgcaccagatttccatgct
agatacaaagctctagagcgcacatatcactatcgtttactttctgggcctgagcgaccg
tcaatctttgagaaaaactcggcttggcacatacctgaggatctaaatatacaagctatg
aagaaagcatgcaatatacttgttgggcatcatgatttcagttcatttcgagcatttgga
tgtcaggcaaaatctccagtgagaactttggatgagcttactgttacagaagtatttcct
gtcatgtttttcccttcaagcttagagcgatcagagatggaatcaccagatgggtctctt
gtttattcaagggcatcactcatgggatcttctggagaaagatctgatgtttctagtact
actagtaggaaattagtatgcgagaatggacaagagtttggaaagagattaaggcaccgc
tgctttgttgttactgcaagggcacagtctttcctttaccaccaggtaagattgatggtc
ggtcttctgaaagctgttggaataggagatctaacaactgctgatgtggagagaattctg
gatgcaaagacaatgactgctgcacctcctatggcacctgcttacgggctttaccttgac
aacgtgaaatatgacccgattgtttaa
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