Triticum dicoccoides (wild emmer wheat): 119308672
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Entry
119308672 CDS
T07278
Name
(RefSeq) protein RDM16-like
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119308672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdc03041
]
119308672
Spliceosome [BR:
tdc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
119308672
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GFIT
Motif
Pfam:
PRP3
Prp3_C
SabA_adhesion
Motif
Other DBs
NCBI-GeneID:
119308672
NCBI-ProteinID:
XP_037440697
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Position
5B:complement(319612532..319616112)
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AA seq
823 aa
AA seq
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MDRDRSSRRDRDRGEDRHTTHERSDDHHGRRRHDSDGHQHHHKRDAEDDHRRRRHDDGGV
EEDRRRARRHRSYSPSESPPTAKRDRSSSRAPRDSVERRDSADREQLPPPSRKRKDHDSG
RRDGDEPDREGGKRPRASVEPPPRKEERPRRERRRFEDVDAYGDERGKGDKGSLSREHRK
VESGANGDSQSGAATNGGAQQPLNSAPAVAVPSANPVSSKVSSITTTNENGGVSIRSDEV
TGKSSTDGTANSSAGRSSNLSLDALAKAKKALQLKKELSEKLKRLPALNKLGTTIPDTQT
PKKETQSVSGSSASAVHVGASSELPASSVSAGISGLTNIPNLDAVKRAQELAAKMGFRQD
PQFAPLINMFPGTSSELTVPQRPAKAPVLRLDAQGREIDENGNVISMTKPSNLSTLKVNI
NKQKKDAFQIIKPDLESLAKATVHFDERMGINPTKLLRPKRPGFQFIEEGKLSRQAELQR
IKNQFGEAQAKELKVKQAQLAKAKVEVDMNPNLIEIAPGGRPPKQKQKEEIPDIEPWDSK
ILVSPTYEDISLEKLNMDKITIYVEHPEPLEPPAEPAPPPPQPLKLTKKEQKKLRTQRRL
AKEKDRQEMIRQGLLEPPKPKVKMSNLMKVLGAEATQDPTRMEMEIRTAAAEREQAHVDR
NIARKLTPSERREKKERKLFDDPNTLGCIVCVYRIRDLSHPQTRFKVDVNAQENRLTGAA
VITDGISVVVVEGGRKSIKRYNKLMLNRIDWAAAVGGEDDADEEPDRPVNSCVLVWQGSV
VKPTFPRFGVHQCRSEAAAKKVFADAKVPHYWDLAVNFSEDSS
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcgaccgatcttctcgccgcgaccgcgaccgcggtgaggaccgccacaccacc
cacgagcgctcggatgaccaccacggacgccgccgccacgacagcgacggccatcagcac
caccacaagcgggacgccgaagacgaccaccgccgtcgtcgccacgacgacggtggtgtc
gaggaagaccgccgccgtgctcgccgacaccgttcgtattccccctccgagtccccaccg
accgcgaagcgggatcggtcgtcgagccgcgccccccgggattccgtcgagcgccgcgat
tcggccgaccgcgagcagctgccgccgccgtcacggaaacggaaggaccacgacagcggc
cgccgcgacggcgacgagcccgaccgtgaaggcgggaagcggccgagggcctcagtggag
cctcctccgaggaaggaggaaaggccaaggcgagagcgcaggaggtttgaggacgttgat
gcgtatggtgatgagaggggtaagggggacaagggcagtttgtctcgtgagcacaggaag
gtagagtctggtgctaatggagattcacagagcggcgcagccactaatggtggcgctcag
cagccgctcaattctgcacctgctgttgcggtgccatctgctaatcctgtttcttcaaag
gtatcttcgattaccaccaccaatgaaaatgggggagttagtattagatctgatgaagtt
actggaaaatctagtacagatggaactgcaaattcatccgctggcagaagtagtaactta
agtcttgatgctttagcaaaagctaaaaaagctttgcaactgaagaaggaattatcagaa
aaactcaagagattacctgcgcttaataaacttggcactactattcctgatacacaaact
cctaagaaagaaacacagtctgtttctggctcgagtgcatctgcagtccatgtgggtgca
tcttctgaactgcctgcaagtagtgtctctgccggcatttcagggcttaccaacattccc
aatttggatgctgtgaagcgagcacaagagcttgctgctaagatgggatttcgccaggat
ccacagtttgcacctcttatcaacatgttccctggtacatccagtgaactgactgttcct
caaagacctgccaaggctcctgttctccgtcttgatgctcaaggtagggaaattgatgag
aatggaaatgttatcagcatgaccaagccaagcaacctgagtactctaaaggtcaacatt
aacaagcagaagaaggatgcattccagattatcaaaccagacttggagtcgcttgcaaaa
gctactgttcattttgatgaaaggatgggcatcaacccaactaagctccttcgtcctaaa
aggccaggattccagtttattgaggaaggcaaactttcgaggcaggctgaattgcagagg
atcaagaatcaatttggcgaagcacaagccaaagagcttaaagtaaagcaagctcaactt
gctaaggcaaaggtcgaggtagacatgaacccaaacctaattgaaattgctcctggtgga
aggcctccaaagcaaaagcagaaggaagagattcctgacattgagccatgggactcaaag
attttggtatctcctacgtatgaggacatctccttggaaaagcttaatatggataagatc
accatctatgtggaacatccagaaccattggaaccaccggctgagcctgcaccaccaccg
cctcagccacttaagctgactaagaaggagcagaagaagctcagaacacagaggcgcctc
gctaaggaaaaagataggcaagaaatgattaggcaaggcctcttggagccaccaaagccc
aaggtcaagatgagcaaccttatgaaagtacttggtgcagaagctacacaggatcccaca
cgtatggagatggaaatccgaactgctgctgcagagcgtgagcaggctcacgtggaccgc
aacattgcccgcaaactcacgccatcagaacgccgtgagaagaaggagaggaagctgttt
gatgatcccaacacactaggctgtattgtttgtgtgtacagaatcagagacctgtcgcac
ccccagacccgcttcaaagttgacgtgaatgcccaagagaaccggctgactggtgcggcg
gttatcacagatggtataagtgttgtggttgtggaaggagggaggaagtcgatcaagagg
tacaataagctgatgctgaaccggattgactgggctgctgcagttggtggcgaggatgac
gccgatgaggaaccagacaggccggtgaatagctgcgtgttagtctggcagggtagcgtg
gtgaagcccacctttcccaggttcggtgtgcatcagtgtcggagtgaggctgctgccaag
aaggtgtttgcagatgctaaagttccacattactgggacctggctgtcaacttttcggaa
gattcgtcttga
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