Triticum dicoccoides (wild emmer wheat): 119308675
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Entry
119308675 CDS
T07278
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform isoform X1
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119308675
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tdc01009
]
119308675
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119308675
03036 Chromosome and associated proteins [BR:
tdc03036
]
119308675
Protein phosphatases and associated proteins [BR:
tdc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
119308675
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
119308675
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
119308675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPP2R1A-like_HEAT
HEAT
HEAT_2
HEAT_EZ
Htt_N-HEAT_1
HEAT_EF3_N
Vac14_Fab1_bd
PDS5
SCD
TOR1L1_N
Cnd1
CLASP_N
Adaptin_N
CEP104-like_TOG
TPR_TNPO3_IPO13_3rd
V-ATPase_H_C
DUF3102
Motif
Other DBs
NCBI-GeneID:
119308675
NCBI-ProteinID:
XP_037440702
LinkDB
All DBs
Position
5B:complement(320140691..320148139)
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AA seq
587 aa
AA seq
DB search
MAMVDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDE
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLSTVEETCVRDKAVESLCRIGAQMKEN
DIVDYFIAVVKRLAAGEWFTARVSSCGLFHIAYPSATDPLKTELRTIYGQLCQDDMPMVR
RAAASNLGKFAATVEQSHLKTEIMSIFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRADLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPQLAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLEDKVFSIREAAANNLKRLAEEFGPEWAMQHIIPQV
LEKINNPHYLYRMTILQAISLLAPVMGAEITCQKLLPVVINSSKDRVPNIKFNVAKVLQS
LVPILDQSVAEKTVKPCLVELSEDPDVDVRYYANQALQACDQIMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatggtcgatgagcctctctatccaattgccgtgctgatagatgagcttaaaaat
gaagatattcaattgcgcctgaactccatcagaagactttccactattgcacgggcactt
ggagaagaaagaaccaggaaggaactgattcctttcctcagcgaaaacaatgatgatgaa
gatgaggtgcttcttgcaatggctgaagaattgggtgtgttcattccttatgttgggggt
gtagagcatgctcatgttttgctcccaccattggagacattgtctacggtggaggaaacc
tgtgtccgagacaaagcagttgagtcgttgtgccgtattggtgcacagatgaaagaaaat
gacattgttgactatttcattgcagtagtaaagaggctagcggctggtgagtggtttaca
gctcgagtatcatcctgtggtcttttccatatagcctatccaagtgccaccgatccgttg
aaaacagaactgaggactatttatggccagttatgccaagatgacatgcctatggtcaga
agggcagctgcatcaaatcttgggaagtttgctgccactgttgaacagagccatttgaag
acagaaatcatgtcgatctttgatgatcttacccaagatgatcaagattcagtacgttta
ttggcagttgaaggctgtgccgctcttggaaaattgttagaaccccaagattgtgtagcc
catatccttccagtcattgttaatttctcccaggataaatcttggcgtgtccgttatatg
gttgcaaaccagttgtatgagctctgcgaggcagttggccctgagcctacaagagcggac
ctggtgcctgcatatgttcgcctcctccgtgataatgaggctgaagtgcggatagcagct
gccggaaaagttactaagttctgtaggatattaagtccacagcttgcaattcagcacatt
ctgccgtgcgtcaaggaattgtcatcagattcgtctcagcatgttcgctcagctttggct
tcagtcatcatgggaatggcccctgtcttggggaaggatgctaccattgaacaacttctt
cctatttttctttctttgctgaaggatgaatttcctgatgttcgactcaacataatcagc
aagcttgatcaagttaatcaggtcattggaattgacttgctgtcgcaatctctattgccg
gctattgtagaacttgcggaggataggcactggagggttcgtcttgcaatcattgagtac
atccctctgctggctagtcagttaggtgttgggttttttgatgacaagctgggggcactt
tgcatgcaatggttggaagataaggttttctcgatcagagaagctgccgcaaacaacttg
aagcgcctggcggaggagtttggtccagagtgggcaatgcaacatataattcctcaggtg
ttggagaagataaacaacccacattatctgtatcgcatgaccatcctgcaagctatctca
ttgctagcccctgtcatgggtgcagaaataacatgccaaaagctgctccctgtcgtcatt
aattcctcgaaggacagagtgccgaacatcaagttcaatgttgcgaaagttctgcagtca
cttgtaccaatccttgatcaatctgtcgctgagaagactgtgaagccttgcctcgttgag
ctgagcgaggaccctgatgtggatgtacgatactatgcaaaccaggcccttcaggcgtgt
gaccagatcatgatgtctagctaa
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