Triticum dicoccoides (wild emmer wheat): 119309570
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Entry
119309570 CDS
T07278
Name
(RefSeq) DNA mismatch repair protein MSH6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119309570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119309570
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
119309570
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
PTM_DIR17_Tudor
Spc25_C_drosophila
nSTAND_NTPase5
Tudor_KDM3B
Agenet
LBR_tudor
Myc_N
Motif
Other DBs
NCBI-GeneID:
119309570
NCBI-ProteinID:
XP_037441447
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All DBs
Position
5B:<391810801..391822378
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AA seq
1259 aa
AA seq
DB search
AEPSPSPLNPKARKPPLVVPSPPPPKPSPSPPPQLQQEKKKHDAAAAPAGEAVGRRLRVY
WPLDDAWYEGTVDAYDGGSRRHRVKYDDGEEEEVDLVKEKFEWAAEEATPPARKLRRLRR
MSDTAKAKSPSVQEDEETGDSTEDEDWKKDAAPEDDSEGEEVELDDEEEEVVAVSSRKGK
SRNSLSTSASVSTLRSTSGLGSASLGSTLSKKRKQVDVGALDCAKKFSFQPANTPEKAEM
KVPPSCDRRERILENAHLALTGDLSERFGSRQMEKFTFLGQGRKDAKGRRPADPTYDPRT
LFLPPQFLKNLTGGQRQWWEFKSQHMDKVLFFKMGKFYELYEMDAHVGAKELDLQYMKGD
QPHCGFPEKNLAVNLEKLAQKGYRVLVVEQTETPDQLELRRRETGTKDKVVRREICAMVT
KGTLAEGESLLANPDPSYILSVTESYPCNSTKSQDGHTIGVCIIDVSTSKFIIGQFQDDP
ERHVLCSILSEIRPVEIIKPAKMLSAETERALKNNTRDPLINGLLPSTEFWDAEKTIHVI
EQYYSSSDNLTASRNTVGVQNNVSSLPDLLSELIEAGDRAYALSALGGSLFYLKQVLLDD
KLLPCAEFEPLTCSGLINNMRKHMILDAAALENLEILENATGGLSGTLYEQLNHCVTGFG
KRLLKRWIVRPLYDCKAILQRQGAIAIFKGVGHECAMQFRKDLCRLPDMERLLAHLFSRC
GENGRSKSVVLYEDTAKRLLQQFTAALRGCQQMFQACSSIRALTGTEGSSLLNDLLSPGK
GLPDVSSVLDYFRDAFDWSEADHNGRIIPLEGCDPEYDAASCAIEEIESSLQEYLKEQRK
LLRDSSVKYVNVGKDTYLIEVSESLRGSVPSDYELQSTKKGVCRYWTPEVKQLISELSKV
ATDKESILKGILQKLIQRFIEHHSKWRQLVSVAAEIDVLVSLSIVGDYFEGPTCCPTIRE
LCGPDDTPTFHARNLGHPIIRSDSLGKGSFVPNNINMGGPGNASFIVLTGPNMGGKSTLL
RQVCLTIILAQIGANVPAENLELSLVDRIFVRMGARDHIMAGKSTFLVELMETASVLSSA
TKYSLVALDELGRGTSTSDGQAIAASVLDYLVHRVQCLGLFSTHYHKLAVEHKDGKVSLC
HMACQVGTGEGGLEEVTFLYRLTAGSCPKSYGLNVARLAGIPASVLQRANEKSIDFEANY
GKRRCATKDKAICTQEDNFATIKDLFRVVKAGNHQEDQATSLSRIREVQLRARAQAMEA
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
gcagaaccctccccgtcgccgctgaaccctaaggcgaggaagccccctctcgtcgtgccc
tcccctcccccaccaaagccgtctccgtctccgccgccgcagctgcagcaggagaagaag
aaacatgatgcagcggcggcgcctgcgggagaggcggtggggcggcggctgcgggtgtac
tggccgctggacgacgcgtggtacgagggcacggtggatgcctacgacgggggctcccgc
cggcaccgcgtgaagtacgacgatggggaggaggaggaggtcgacctcgtcaaggagaaa
ttcgagtgggccgccgaggaggcaacgccgccggccaggaagctgcgacgtcttcggagg
atgtctgacaccgcaaaggcgaagtcgccgtctgtgcaggaggatgaggagactggggat
tccactgaggacgaggactggaagaaggatgctgctccagaggatgattctgagggggag
gaagtggagttggacgacgaagaggaagaggttgttgcggtcagttcgcgaaaggggaaa
tcaaggaactccttgtccacgtctgcttcagtgtccacactgcggtcaacgtctggtctt
ggctcagcatcgttagggtcaacgttatcaaagaagaggaaacaagtggatgtaggtgca
ttggattgtgctaagaagttcagctttcaaccagctaacacccctgaaaaggctgaaatg
aaggtgccaccgagctgtgataggagagagaggattttagagaatgctcaccttgctctt
actggagacctgtctgagcgctttggaagtcggcagatggagaagttcacattccttggg
caggggcgcaaagatgcaaaagggagacgacctgcagacccaacctatgatccgagaact
ctcttcttgcctccccagttcttgaagaacttgacaggtggacagaggcaatggtgggaa
tttaaatcccagcacatggataaggtcctgttcttcaagatgggcaaattctatgaattg
tatgagatggatgctcatgttggggccaaggagcttgatcttcaatacatgaagggtgac
caacctcactgtggcttcccagagaagaatttagcagtgaatttggagaaactagctcag
aagggttatcgcgttctggttgtagagcagaccgagacgccggaccagcttgaacttcgc
cgtagagagacgggtacaaaagacaaggttgtgaggcgtgaaatatgtgcaatggtcaca
aaaggaacactggcagaaggagaatcccttctggcgaatccagatccgtcatacatcttg
tccgtgactgaaagttatccatgtaattcaacaaagagtcaagatggtcatacaattggt
gtttgtataattgatgtttctacaagcaaattcatcattggacagttccaagatgaccct
gaacgtcatgtgctatgttccattttgtctgaaatacgacctgtcgaaatcataaagcca
gctaagatgctgagtgcagaaactgagagggcactgaaaaacaatacaagagaccctttg
ataaatggtttgcttccatctacggaattttgggatgcagagaaaactattcatgtcata
gagcaatactacagctcatcagataatctcactgcttcacgaaacactgttggtgtacaa
aacaatgtgagcagtctgcctgacctattaagtgagctaattgaagctggtgatcgagcg
tatgcgctttctgcccttggaggttctttgttttacttaaagcaagtccttctggatgac
aaattgcttccatgtgctgaatttgagcccctgacatgctcggggctcatcaacaatatg
cggaagcatatgatacttgatgcggccgcactggaaaatttggagatcctagagaatgca
actggtggtctctcagggaccttgtatgaacaattgaatcattgtgttactggatttggg
aaaaggttgctcaaacggtggattgtaaggcctttgtatgattgcaaagcaatactacaa
cgtcaaggtgccattgctattttcaagggagtcgggcatgaatgtgctatgcagttccgt
aaagatttatgtaggcttccagacatggagcgtctgcttgcacaccttttctctagatgt
ggtgaaaatgggagatctaagtcagttgttctatatgaagacacagcaaagagattgctc
cagcagttcactgctgcccttcgtggttgccagcaaatgtttcaggcatgttcttctatt
agggcgttgacaggcacagaggggtcttctctactaaatgatttgctttcaccaggcaaa
gggttaccagatgtgtcatctgttttagattacttcagggatgcatttgattggtcagag
gctgatcataatggtcggatcatacctcttgaaggttgtgaccctgaatatgatgccgct
tcctgtgccatagaggagatcgaatccagtctacaggagtacctgaaggagcaaagaaag
ctactgagggattcatcggttaagtatgtaaatgttggaaaggatacttaccttattgaa
gtgtctgagagcctgaggggttctgttcctagtgactatgagttgcagtctacaaaaaag
ggtgtctgccggtactggacaccagaagtaaaacaactaatatcagaactttctaaggtt
gcaacggataaagaatcaatattgaaaggcattcttcagaaactgattcaacgctttatt
gagcatcacagcaagtggagacagttggtgtctgtggctgctgagattgatgttttggtt
agtctttctattgtgggtgattattttgagggaccaacatgctgtccaactatcagagaa
ttgtgtggtccagatgatactcctactttccatgcaagaaatcttgggcatcccattatt
cgaagtgattcgttaggcaagggttcatttgtaccaaataacattaacatgggtgggcca
ggaaatgccagctttattgttcttactggtccaaatatgggtggtaaatcaactctcctg
cgtcaagtttgtcttaccataatattggcacagattggagcaaatgttccggcggaaaac
cttgagctttctcttgttgaccgtatctttgttcgcatgggagcaagggatcatattatg
gctggaaaaagtacattcttggtggagctcatggagactgcttccgtgctttcgtcagct
accaagtattctcttgtggctttagatgagcttgggcggggcacatcgacttctgatgga
caagctattgcggcatctgttctagattatctagttcatcgtgtgcagtgtctaggcttg
ttttctacccactaccataagttagcagtggaacataaggatggcaaggtatcactttgc
catatggcatgccaagtaggcactggagaaggaggtttggaagaggtgactttcctttac
agattaacagctggttcatgtcccaaaagctatggcttgaatgttgctcgattagcagga
atacctgcatcagtgcttcaaagggctaatgagaagtcaattgactttgaggctaattat
gggaaacgccgctgtgcaactaaagataaggcgatctgtacacaggaggataactttgct
accattaaggatttgttccgtgttgtgaaggcagggaatcatcaagaagatcaggcaaca
agcttaagcaggattcgtgaagtacagctgcgtgccagggcgcaagctatggaagcatag
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integrated database retrieval system
