Triticum dicoccoides (wild emmer wheat): 119311200
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Entry
119311200 CDS
T07278
Name
(RefSeq) flap endonuclease GEN-like 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119311200
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
119311200
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
SPT6_acidic
Motif
Other DBs
NCBI-GeneID:
119311200
NCBI-ProteinID:
XP_037442736
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All DBs
Position
5B:505962486..505966352
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AA seq
645 aa
AA seq
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MGVGGSFWDLLKPYARQEGPGYLRGRRVAVDLSFWIVSHSTAIRARSPHARRPHIRNTFF
RTLSLFAKMGAFPVFVVDGEPSPLKSQARAARFFRGSGVDPPASSSAEAEGDASAPAPVK
ARNAIFTRCVKDCVELLKNLGMPVLWAKGEAEALCAQLNNEGEVDACITSDSDAFLFGAK
TVIKVMRSNCKEPFECYNIADIESGIGLKRKQMVAMALLIGSDHDLHGVPGFGVETALRF
VRLFDEDQILDKLHEIGKGIYPFLEGFDKAHVDDLPSPSTKSPPVARSPHCSHCGHPGSK
KNHSKTGCNYCLVDSLEFCMEKPAGFICECPSCEKARDLKAQRRHENWQIKVCKRLAAET
NFPNEEIIKLYLCDDNLDKESGDRKLEWTDPKVDDLVDLLTYMQNWEPSYVRQHMLPMLS
TIYMRKMASSPCKSLLLCDQYEFHSIQRIKIKHGHPYYLVKWKRATGGIVSGGASHKKPE
LDGESHAEVVVLDDDEEEEEEEEATVNIESADSLDEPDLPQVLRDDDQVFLLTDEDIQLV
NAAFPNEARQFQEAQRLKEAKSRSRKSKLSQAESMLETPKGPRPSGVQLSIKEFYRSKKA
AGDEAGKKPVIEGETSTSRAGSRKSPPVDLTKRMPKSLRRRLLFD
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtggggggcagcttctgggacctcctgaagccgtacgcgcggcaggaggggccg
gggtacctccgcggccgccgcgtcgccgtcgacctctccttctggatcgtctcccacagc
accgccatccgggcgcgctcgccccacgcgcgccgcccccacatccgcaacaccttcttc
cggacgctctccctcttcgccaagatgggtgctttcccggtgttcgtggtggacggcgag
ccgtcgccgctcaagtcgcaggccagggccgcgcgcttcttccgaggctctggggtggac
ccgcctgcgtcgtccagcgcggaggcggaaggggacgccagtgccccggcgccggtgaag
gccagaaatgctatcttcacgcgatgcgtcaaggactgtgtggaattgcttaaaaatctt
ggaatgccagtattgtgggcaaagggtgaagctgaagccctttgcgctcagttgaacaat
gagggtgaagtggatgcctgcattacttcagacagtgatgcttttctctttggagctaag
actgtcataaaagtgatgcggtcgaattgtaaggaaccttttgagtgctacaacatagca
gatattgagtctgggattggattgaagaggaaacaaatggtagccatggcacttcttatc
ggcagtgaccatgatttgcatggcgtgcctggctttggtgttgagaccgcacttcggttt
gtgcggttatttgatgaagatcagattttagataaattacatgaaattggtaaaggaatc
tatccattcctagaaggatttgacaaggcccatgttgatgatctaccatcaccatccaca
aagagcccaccagttgcgagatcgcctcactgctcacactgtggtcaccccggtagcaag
aaaaatcacagcaagactggatgcaattattgcttggtggattcattagagttctgcatg
gaaaaaccagctggtttcatatgtgaatgtcctagctgtgaaaaggcgcgtgatctgaaa
gcacagagaagacatgagaattggcaaatcaaggtgtgcaaaagattagctgctgagaca
aatttcccaaatgaggagataattaaattgtatctatgtgatgacaatttggataaagaa
agtggtgatcgaaagcttgagtggactgatcctaaagttgatgatttggttgacttgcta
acttatatgcagaactgggaaccgtcgtatgtccgacagcacatgctccctatgctatca
actatatatatgcgcaaaatggcttcatctccgtgtaaatcattgcttctctgtgaccaa
tatgagttccattcaattcagcgcattaagataaaacatggccacccttactacctggtc
aaatggaagagggccactggtggtattgtttctggtggtgcgtctcacaagaagccagaa
ttagatggggagagtcacgctgaggtggtggttttggacgatgacgaggaggaggaagag
gaggaggaggcaacggtgaatattgaatctgctgactcgttggatgagccagatctgcca
caagtactcagggatgatgatcaagtatttctattgactgatgaagatatacagctcgtg
aatgctgcatttcctaatgaagcacggcagtttcaggaagcacagaggctcaaagaagca
aaatcaagatcacggaaatccaagctgagccaagcagagagcatgctggagacaccaaag
ggtccaagacccagcggggttcagctcagcatcaaggagttttaccggtcgaagaaagcg
gcgggagacgaagccgggaagaagccggtcatcgagggcgagacgtctacgtcgagagct
ggctcgagaaaatcaccaccggtggacctgacaaaaaggatgcccaagtccctgcgacga
cgcttgctcttcgactga
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