Triticum dicoccoides (wild emmer wheat): 119311518
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Entry
119311518 CDS
T07278
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03440
Homologous recombination
tdc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119311518
03460 Fanconi anemia pathway
119311518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119311518
Enzymes [BR:
tdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
119311518
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
119311518
FA (Fanconi anemia) pathway
Downstream FA components
119311518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
Motif
Other DBs
NCBI-GeneID:
119311518
NCBI-ProteinID:
XP_037443045
LinkDB
All DBs
Position
5B:complement(549986486..549996192)
Genome browser
AA seq
1351 aa
AA seq
DB search
MGAAHDGDGDFAATPAPTPAPGRGGVYQVSGVPVEFPYKPYGTQLAFMGRVIATLDRGRR
QGRSHALLESPTGTGKSLSLLCAALAWQRHYPLRAPPAPAAADPLLHGGGFVPDDTQQQQ
PTPGVPEKAAAAKKKNAPTIYYATRTHSQITQVVRELRKTSYRVRMAILASRKHYCVNKT
ACMSDSIDEECKRLLDDKVQGCREFKNAQKLSRHPSLQTGGSYEVHDIEDLLRVGRQVQG
CPYFAAQTMAEAAQLVFCPYNYLISPIVRRAMDINIAGSIVILDEAHNIEDIARDSGSVD
VDEESLNSLKEELAKLATDQAVGKIYQPLHDIIEGLSTWIAAQEGDPRDNEFDHPPSFWT
GENAVKELQKAGITPAYFPILQECATKAVKAASDTESEGDHLTGRGAITLESLFSSLSHF
FGRNGRHLYDYQLAIQRFAHREGTSAFGVRNVMSLWCLNPAVVFQDIADLTHSVILTSGT
LSPMGSFASELGVQFDACMEAPHVIDADSQVFASVLSSGPTTHRLNASYKTADAYSFQDE
LGASIEEICRIVPGGALVFFPSYKLLDKLKVRWSQTGQWARLNAQKPVFVEPRGSSEELE
PVLNGYYNAILGKVPLKKGRGGAKQIVKNRVRKNSSQESAKGGAAFLAVCRGKVSEGIDF
SDDNARVVVIVGIPFPNINDVQVKLKKKYNDSYKSSKNLLSGSEWYCHQAFRALNQAAGR
CIRHKFDYGGIILIDERYQEERNLLHISKWLKNSIKHYGSFQETMDKMEKFFQKAEEHIK
IKRQEMSTKAKLGDDLLTSHGDKRKLHWPEPNFSKHSVLQSNQKGKLDDNLLASHGDKRK
LPCPEPDFSKHSVLQSNQKVKNERGSLKVSNIDVVGVDHENYGRPCTSSEACQVSSKSSD
FTKKKSYPVPGSLSTACQLPPSHKIHNNLEDESDIGGDHEVDINVIDLEICDSMSGHAKL
TIFTPPVPTLVERTSAEDPVASPSIHSEVNTSAAMDNGEDQVIGVSASLSTANRNQSCVS
TSAGTPERTANRGYHLHHESSMDRSVNSQYQKRRRFNIPVSCCTGTEHSNPSNPSSTSFC
NTDCAVSMVPGDLKRTDGLCCESLKMSRCENFKLERSHKAAEFASNKSAGTRLDIRCTTC
KTPLGLQKDGFLVSCSLASPSKLYLTCLLRHGLSTVGFVEDLMSSPPAVVNVLVCDASSL
DQEILGKFCSEGSAHQSGVWSEKDGCVYKPVACPFCPRENSFATVLGAQVLAADASNLES
LNKVLLFADRLDLKNEPSNEQVARDHTVASNPMGTDASKPMSPPPVIDLESFAYKPVKKE
PVSLSTRRSKLRLPSTDRSTKPQLVHNVEDS
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccgcccacgacggcgacggcgacttcgccgccaccccggcgcccacgcccgcg
cccggccggggcggggtgtaccaggtgagcggcgtgccggtggagttcccctacaagccg
tacggcacgcagctggccttcatgggccgcgtcatcgccacgctcgaccgcggccgccgc
cagggccgctcccacgcgctcctcgagtcgcccaccggtaccggcaagtcgctctccctc
ctctgcgccgcgctcgcctggcagcgccactacccgcttcgcgcgccccccgcccccgcc
gccgccgaccccctcctccacggcggcggcttcgtccccgacgacacccagcagcagcag
cccactcccggcgtcccggagaaggcggcggcggccaagaagaagaacgcgccgaccatc
tactatgccacgaggacgcactcgcagatcacccaggtggtccgggagctgcgcaagacc
tcgtaccgtgtgcgcatggccatcttggcctcacggaagcactattgcgtcaacaagacc
gcgtgcatgtctgactcaattgacgaggaatgcaagaggctcctagacgacaaagttcaa
ggatgccgagaattcaagaatgcacagaaactgagtcgtcatccatcccttcagaccggt
ggctcctatgaagttcatgatattgaggatcttcttagggtcggaaggcaagtccaagga
tgtccatattttgctgcgcaaaccatggcagaagcagctcaactggttttctgcccatat
aactacctaattagtccaattgtcaggagagcaatggacattaatatcgctggctcaatc
gttattctcgatgaagcgcacaacatagaagacatagcacgtgattctggaagtgttgat
gttgatgaagaatcacttaacagtctcaaggaagaactagcaaagttagccactgatcag
gctgttggaaagatataccaacccttgcatgacatcattgaggggcttagcacttggatt
gctgctcaggagggtgatccacgagataacgaatttgaccatcctccttcattttggact
ggtgaaaatgctgtgaaggaactccagaaggccggtattactcctgcatacttcccaata
ttgcaggaatgtgcgacgaaggcagttaaggctgcttcggatactgagtcagagggagac
cacttaactggtcgtggtgctataacactggagagtctattctcctcactgagtcatttt
tttggtaggaatgggcgccatttgtatgattaccaacttgctatccaacggtttgctcac
agagaaggtacttctgcctttggagtgagaaatgtgatgagtttgtggtgcctcaatcct
gctgttgtttttcaagacattgcagatctaactcattcagtaatattgacatctggaaca
ctctctccaatgggctcctttgcatctgaactcggtgtacagtttgatgcttgcatggaa
gctcctcacgtaatcgatgctgattctcaggtttttgctagtgtattgtcatctggccca
acaacacatcggttgaatgccagctataaaactgcagatgcgtattctttccaggatgaa
cttggagcttcgatagaagaaatatgcagaatagtgcctggtggtgctctagtgtttttt
cctagctataagttgttggacaaactgaaagtgcgctggtctcaaactggtcagtgggca
cgattgaatgctcaaaagccggtgtttgttgagcctagagggagtagtgaggaactcgag
cctgtcctaaatggatattataatgcaattcttggtaaggttcctcttaagaaaggcaga
ggtggtgcaaaacaaattgtgaagaatcgagtgagaaagaattcatcacaggaatctgct
aaaggaggagctgcttttcttgcagtttgccgtgggaaggtatctgaaggaattgacttc
tccgatgacaatgctagggttgttgtcattgttggcattccgttcccaaatataaatgat
gtccaagtaaagctgaaaaagaaatataatgattcctacaaatcatcaaagaatcttttg
agtgggagtgaatggtactgtcaccaagcatttcgtgctctgaatcaagctgctggtcga
tgtattcggcataaatttgactatggaggcataattttgattgatgagcgatatcaggaa
gagagaaaccttctacacatttcaaaatggcttaaaaactcaattaagcattatggtagc
ttccaggagacaatggataagatggagaagttttttcagaaggctgaggaacatattaag
atcaaacgtcaagaaatgtccactaaggctaagttgggtgacgatctacttacatcacac
ggtgataaaagaaagttgcattggccagaaccaaatttctcaaaacactctgtactgcaa
agtaatcagaagggtaagttggatgacaatctacttgcatcacacggtgataaaagaaag
ctgccttgtccagaaccagatttctcaaagcactcagtactgcaaagtaatcagaaggta
aagaacgaacgtggcagtctgaaggtttcaaacatagatgttgtgggagtagaccatgaa
aattatggcaggccttgcacatcatccgaagcatgccaggtctcttcaaaatcttctgac
ttcacaaagaaaaaaagctaccccgtaccaggaagtctttcaacagcatgccaactccct
ccatcgcataaaattcataataatttggaagacgaatcagacattgggggagatcatgaa
gtcgatataaatgttatcgacttggaaatctgtgattctatgtctgggcatgcaaagtta
acaatcttcactccaccagtgcctactcttgtggaaagaacttctgctgaggatccagtt
gctagccccagcattcattctgaggtaaatacatccgcagcgatggacaatggtgaagat
caggtcataggcgtgtctgcttcgctctcaacagctaacagaaaccaatcttgcgtatca
acatcagcgggtactcctgaaagaacagccaatagaggttatcatttgcatcatgaatct
tcaatggacagaagcgtaaattctcagtaccagaaaaggagaaggtttaatataccagtg
agctgttgtactggcacagagcattctaatccttctaatccttcaagcacatctttctgc
aatactgattgtgctgttagcatggtgcccggagatctgaagagaactgatggtctgtgt
tgtgaaagtctgaaaatgtctaggtgtgaaaatttcaagcttgaaagaagtcacaaggcg
gcagagtttgcatcaaataaatctgcaggaacaaggcttgatattcgttgcaccacatgc
aaaacgccacttggattacagaaggatggctttcttgtttcatgttcattggcatcgccc
tcaaaattgtacttgacatgtcttttaagacatgggctatcaactgttggcttcgtagaa
gatcttatgtcatcgccaccagctgtggtaaatgttcttgtatgtgatgcttcttcactc
gatcaagagatccttggcaaattctgcagcgaaggctctgctcatcagtctggtgtttgg
tctgagaaggatggatgtgtatacaagccagtagcatgtcctttctgcccacgtgaaaat
tcttttgccacggtgctcggagcgcaagttcttgcagctgatgcttcaaatctagaatca
ttgaacaaggtgctcctgtttgctgatcgtttggatctcaagaatgaaccatcaaatgaa
caggttgcaagagatcatacagttgctagtaatcccatggggacagatgctagtaaaccc
atgtcacccccaccggtgatcgatcttgagagttttgcttataaaccagtgaagaaggaa
cctgtgtcactaagcacaaggaggtccaagcttaggttacctagcacggacagatccaca
aaaccacaactggtgcataacgtggaggactcatag
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