Triticum dicoccoides (wild emmer wheat): 119311705
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Entry
119311705 CDS
T07278
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28-like
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdc03041
]
119311705
03009 Ribosome biogenesis [BR:
tdc03009
]
119311705
Enzymes [BR:
tdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119311705
Spliceosome [BR:
tdc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119311705
Ribosome biogenesis [BR:
tdc03009
]
Eukaryotic type
Pre-60S particles
Helicases
119311705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
119311705
NCBI-ProteinID:
XP_037443287
LinkDB
All DBs
Position
5B:complement(572072534..572075159)
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AA seq
779 aa
AA seq
DB search
MDPDFRFDPDGSDDEAPAGAAARRKPAQSPWEFSTYAESVAAEHAARRTTSIDEKISQAL
RGRRNPSMPDGSEDEEDDDADDDSDEEAAVKGESGDDEDEIEESDDDDEEIESSGGEEDG
EVEAGGQEEEEEEEEVGEEEEAVQEEDDAPEQPDPSQFFASSEGASFSARSFLELNLSRP
LIRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRPKRVP
AIRVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLPTKAQEVALRSNPDIVVATPG
RIVDHLRNSLSVGLEDLAVLILDEADRLLELGFSVEIGELIRMCPKRRQTMLFSATMTEQ
IDELVKLSLNKPVRLEADPSLKRPATLTEEVVRIRRSREATQEAVLLALCLKTFKERVII
FSGTKHSAHRLKILFGLSGIKAAELHGNLTQAQRLEALEQFKKQEADILIATDIAARGID
IVGVRTVINFACPRDVKTYLHRVGRTARAGREGYAVTFVTDDDRSLLKAIAKKAGSQLKS
RIVAEKPVSDCAKLIEQLEHQISNIILEEREEMALRKAEMEATKAENMIAHRDEIYSRPK
RTWFATEKEKKLLAKAAKESLDQVKGGSVVVSAQQAEDLRLKEKRRREREKNLPRKKRRK
LEAQREMLEEEKEDEEEAQESKGGKKAKSSQSVVDVAYRRAKSMKATGKTGIRASKGKND
KGSKQPSEKGQTRQEEMHELFQNDMSEWKQGRSLKKKDTSFAKKSKNSFKSKSRYKRRK
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggaccccgacttccggttcgacccggacggctccgacgacgaggcgccggcgggggcc
gccgcgcgtcgcaagcccgcgcagtcgccgtgggagttctccacgtacgccgagtccgtg
gcggcggagcacgcggcgcgccgcaccacctccatcgacgagaagatctcccaggccctc
cggggccggcgcaacccctccatgcccgatggctccgaggacgaggaggacgatgatgct
gatgacgacagcgacgaggaggcggcggtgaagggggagagcggggacgatgaggacgag
atcgaggagagtgacgacgacgacgaagagatcgagtcgagcggcggggaggaggatggt
gaagtggaagctggcgggcaagaagaagaggaagaggaggaagaggtgggggaagaagaa
gaggctgtgcaagaggaagacgatgcacccgagcagccggatccatctcaattcttcgcg
tcatcggaaggagcttcattcagtgcaaggtcgtttcttgagctcaacttatcgcgtcca
ctcattcgggcctgtgaagcgctgggctaccagaaaccaacaccaattcaggccgcgtgc
atccctctggcattaacagggcgggacatatgcggcagcgccataacagggtcagggaag
acggctgctttctctctgcccgtgctggagcgtctgcttttccggccgaagcgcgtgcct
gccatcagggtgcttattctcactccaaccagagagctggctgcgcaggtgcatagcatg
attgagaaactggcccagtttactgatatcaggtgctgtctcatagtgggtgggcttcca
accaaggcacaggaggtggccttaaggtcaaatcctgacattgttgttgccactcctggg
cgtatagtggatcatctgcgcaactccctttctgtcgggcttgaagatcttgcagttttg
atccttgatgaagctgaccgtttgctggaattgggtttcagtgttgaaattggtgagctg
attcgcatgtgtcctaaaagaaggcagaccatgctcttttctgccacaatgacagagcaa
atcgatgagcttgtgaagctttctctgaacaagccagtccgtcttgaagctgatccttcg
ctgaaacgccctgcaacattgactgaagaggtggttagaattcggcgatcacgtgaagca
actcaagaagctgttctgcttgctctctgtttgaagaccttcaaggaaagagtgatcatt
tttagtgggacaaagcattctgctcacagactgaagatactgtttggtctgtctgggata
aaagctgccgagcttcatggcaaccttacacaggcacagcggcttgaggctttagaacaa
tttaaaaagcaagaagcggacatcctgattgcaactgatattgcagctcgtggtattgac
attgttggtgttcgaactgtcataaattttgcctgcccacgtgatgtcaaaacttacctt
catcgtgttggccgtactgcaagggctggcagggaaggatatgccgtgacgtttgttact
gatgatgatagatccctcttgaaagctattgcaaagaaggctggttctcagctgaaaagc
cgcattgttgccgagaaacctgtgtctgactgtgcaaaattaattgagcaactggagcat
caaatttctaacataattctggaagaaagggaggaaatggcattgagaaaggctgaaatg
gaagctacaaaggcagaaaatatgatagctcacagggatgagatatattcacgccccaag
agaacctggtttgctactgagaaggaaaagaaacttttggcaaaggctgctaaagaatcc
ttggatcaagttaaaggtggttctgtagttgttagtgctcagcaagctgaagatcttcgt
ctgaaggagaaaagaagaagagagcgtgagaaaaacctacctaggaagaagcgcagaaaa
ttggaggcgcaacgggagatgctggaggaggagaaggaagatgaggaggaagctcaggaa
agcaaaggagggaagaaagcaaagagtagccaatctgtagttgatgtcgcttatcgcagg
gcaaaatcaatgaaggcgactggcaaaaccggcattcgtgctagcaaaggaaagaatgat
aaagggtcaaaacagccttctgaaaagggccaaaccaggcaagaggaaatgcatgagctg
ttccagaatgatatgagtgaatggaagcagggccgttccctgaagaaaaaggacacctcg
tttgcaaagaaatctaagaattcattcaagagcaaatcaaggtacaaacgacgtaagtag
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