Triticum dicoccoides (wild emmer wheat): 119312208
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Entry
119312208 CDS
T07278
Name
(RefSeq) uncharacterized protein LOC119312208
KO
K08735
DNA mismatch repair protein MSH2
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119312208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119312208
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
119312208
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Gene cluster
GFIT
Motif
Pfam:
Tcf25
MutS_III
MutS_II
Motif
Other DBs
NCBI-GeneID:
119312208
NCBI-ProteinID:
XP_037443842
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Position
5B:complement(634321638..634325424)
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AA seq
855 aa
AA seq
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MKALSTPVASVVAPPLPGSASVNIEDANDRQGAAIAAPHMEVVNQKANSVETTGSASPST
GMFLAIAAPAETLPAPELATLMPNICSTECSQEDANKVTHVVPLDASRLITAPLSNILCN
TSPCAMPLVYADTDEEQIGKSGAMQPLWPPRAPPSTWQLQCVEHPIVNLTELKPWPDPCM
SKSSGGREMPPWTQYAIGPGKSDKFLDLYEGSGSSWRLTKCGTPGNIGSFEDILFANNDM
QYSPVIVVLFPDFHERLLYVWPSYVDMTNRKLGLAEFPEDSRFINMESALVALGCKACLL
LADFEKSIDLQALQDAIINCNILLTERKKAEFKSRDLVQDLGRIIRSYVEPVRDLLSQFD
YTLGALGALVLYAELLADDTNYGNYMIEKYNLDCYIRLDSAAVLALDIVEGKTDANKQFR
LFGSIKRTCTAGMGHRVLNKVPKQPPLGVNDINNRLYMVQTFAEDSELCQGLRQQLKMMS
DIDRPTHALCKKSANQPAVTLYKFCSRISYIQSGLQQYNGQFSTFTRTRFLSSFEVWLTE
NQYGRFPNLVEIDIDIDQVANAEYRISPPRLWPPWDTYDPSVSHVQEWFEAARNMKNLDR
SGCPRSALEACKFLLPLDSDDPKGALFCMDSFALRLKQYKWLEQFAEEYQCDNSLWLFPN
FSFSRDVASEDVSNDVDKTTVVDLLKQAFMLHPLVLSKMVDMAPLNDSSWTQILENVFCT
CQHGCSPDGAIENFQKIGIELGGLNTTKHTYEEDFSFFHQLVISSLIGPNHILLPYDPGG
LALRLDECGGISDSRMFITGLRASRISREEECNTPPMGCHPILRRPGLQDGPFIGGQFPH
VTGYICNRESTGKGS
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccttatccacacccgttgcatctgtcgtagccccgccattgccaggctccgca
tcagtgaacatcgaggatgccaacgataggcagggggcggccatcgcagctccacacatg
gaggtcgtcaaccaaaaagccaacagtgtcgaaaccacaggatcagcctcgccctctaca
ggcatgtttttggcaattgcagcacctgcagaaactctgccagcccctgagttggcgaca
ctgatgcccaacatatgttcgacagaatgctcccaggaagacgccaacaaggtgacccat
gtggtcccgttggatgcatctcgcttgatcacggcaccgctcagcaacatcctctgcaac
acttcaccttgtgctatgcctttggtgtacgcagatactgacgaggaacagattgggaag
agtggtgccatgcaaccactatggccaccacgagcaccaccaagtacatggcagttacag
tgcgtggaacatcctattgtaaatttgactgagctgaaaccatggccagatccatgtatg
agcaagagcagtggaggcagggagatgccaccgtggacacaatacgctatcggtcctgga
aagagtgacaagtttctggacctttatgagggaagtgggtcaagttggaggttaacaaaa
tgtggaacacctggaaacattggcagttttgaagatattctatttgcaaacaacgacatg
caatattctccggttattgttgtattgtttcctgacttccatgaacgcctgctgtatgta
tggcctagttatgtggatatgacgaaccggaagcttgggttggctgagttccctgaagat
agtagattcataaatatggaatcagcccttgttgcattaggttgcaaggcttgtcttctt
cttgcagattttgagaaatcaatagatttgcaagctcttcaggatgctattatcaattgc
aatattcttctgactgaaagaaagaaggctgaatttaaatctagagatcttgtgcaggat
cttggtagaataatcagaagttatgtcgagccagttcgtgatctcctatctcagtttgac
tatactttgggtgcccttggagctctagtattatatgctgagttgctagcagatgatact
aattatggaaattacatgattgagaaatacaatttggactgctacatacgacttgattct
gctgcggtgctagcattggatattgttgaaggaaaaactgatgcaaacaaacaatttagg
ttgtttggttcgataaaaagaacttgcactgctgggatggggcatcgagtacttaacaaa
gtgccaaaacaacctccgttgggtgtcaacgacataaataacagattatatatggttcag
actttcgcggaagattccgagctttgccagggtcttaggcaacaacttaaaatgatgtct
gatattgatcgcccaacacatgctctctgtaagaaatcagccaaccagcctgctgttacg
ctctacaagttctgctctagaatctcgtacatccagagtggtcttcagcaatacaatggc
caattttctacattcacaaggacaaggttccttagctcttttgaagtgtggctgacagag
aatcaatatggtaggtttcctaatcttgttgagatagatattgacatcgatcaagtagcc
aatgctgagtacaggatatctccacctcgcttgtggccaccatgggacacatatgatcct
tctgtcagccatgtgcaagaatggtttgaagccgccaggaacatgaaaaacctggatagg
agtggttgtcctcgttcagctttagaggcatgcaagtttcttttgccattagattcagat
gacccaaagggtgctctgttttgcatggactcctttgctctaagattgaagcagtacaaa
tggttggaacagtttgctgaagagtaccaatgtgataactccctttggctgttccccaat
ttctccttttcacgtgatgtggcatctgaagatgtttctaatgatgttgacaagacaaca
gttgtagaccttttgaagcaagcattcatgcttcaccctctggtgctttccaagatggtt
gacatggctcctttgaacgactcttcatggacccaaatacttgagaatgtgttctgcaca
tgccaacatgggtgttcccctgatggtgcaatagaaaattttcagaaaattggcattgaa
ttgggaggactgaacactaccaagcacacttatgaagaggatttcagtttctttcatcag
cttgtgattagcagtttaatcggccccaaccacatacttctgccatatgatccaggtggc
ttggctcttcggctcgacgagtgtggcggcatttctgattcaaggatgttcatcaccggc
ttgagggcaagccgaatttcaagggaggaagagtgtaacaccccacccatgggctgtcac
cctatacttcgtaggcctgggctacaagatgggccgttcattggaggtcagtttccacat
gtcacaggctacatatgcaatcgagagagcacgggtaaaggcagctaa
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