Triticum dicoccoides (wild emmer wheat): 119312351
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Entry
119312351 CDS
T07278
Name
(RefSeq) squalene synthase 1-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00100
Steroid biosynthesis
tdc00909
Sesquiterpenoid and triterpenoid biosynthesis
tdc01100
Metabolic pathways
tdc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
119312351
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
119312351
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tdc01006
]
119312351
Enzymes [BR:
tdc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
119312351
Prenyltransferases [BR:
tdc01006
]
Terpene biosynthesis
Squalene/phytoene synthase
119312351
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
119312351
NCBI-ProteinID:
XP_037443975
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Position
5B:complement(651771909..651777743)
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AA seq
404 aa
AA seq
DB search
MGVLSRPEEVPALLRLKLAAGRIRRQIPPQEHWAFAYDMLQRVSRSFALVIQQLGPELRN
AVCVFYLVLRALDTVEDDTAIPNEVKLPILRDFYRHIYNPDWLFSCGANDYRVLMDNFRQ
VSTAFLELGEGYQKAIEEITRRMGEGMAKFICTEVETIDDYDEYCHYVAGLVGYGLSRLF
HATGTEDLAPDHLSNSMGLFLQKTNIIRDYLEDINEIPRCRMFWPREIWSKYVDKLEDLK
YEENSEKAVQCLNDMVTNALIHAQDCLQYMSALKDNSNFRFCAIPQIMAIGTCAICYNNV
KVFRGVVKMRRGLTARVIDETKSISDVYSAFYEFSSLLESKIDDNDPNAALTRRRVDAIK
KTCKSSGLLKRRGYDLEKSKYRMPMLIMIMLLLVAIILGVLYGK
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgctgtcgcggccggaggaggtgccggcgctgctcaggctcaagctggcggcg
gggcggatcaggcgccagatcccgccgcaggagcactgggccttcgcctacgacatgctg
cagcgggtctcccgcagcttcgcgctcgtcatccagcagctaggccccgagctccgcaat
gccgtctgcgtcttctacctcgtgctccgggccctggacaccgtcgaggacgacaccgcc
atccctaacgaggtcaagctgcccatccttcgggacttctaccgccacatctacaacccg
gactggctcttttcatgtggagcaaacgactacagagtgctcatggataattttaggcaa
gtctccacggctttcctggagctaggcgaaggataccaaaaggctattgaagaaatcact
aggcgaatgggagaaggaatggctaaatttatatgcacggaggttgaaaccattgatgac
tatgatgagtactgccactatgtagcagggctagtaggctatggactttctaggctcttt
catgctactggcacagaagatctggctccggatcatctttcaaattcaatgggtttattt
ctacagaaaaccaatataataagggattatttggaggacataaatgagataccaaggtgc
cgtatgttctggcctcgggaaatatggagtaaatatgtcgataaacttgaggatttaaaa
tatgaggaaaattcagaaaaggccgtgcagtgcttgaatgatatggtgaccaatgctttg
atccatgcccaagattgccttcaatacatgtcagcattgaaggacaactccaattttcga
ttttgtgcaatacctcagataatggcaattgggacatgtgctatttgctacaataatgtg
aaagtctttagaggagttgttaagatgaggcgtgggctcactgcacgggtgattgatgag
acaaaatcgatatctgatgtctattctgctttctatgagttctcttcattgctagagtcg
aagattgatgataacgacccaaatgctgcgctgacacggaggcgtgtggatgcaataaag
aaaacttgcaagtcatccggcctgctgaagagaaggggttacgatctggagaaatcaaag
tacagaatgcctatgctgatcatgatcatgcttctgttggtggctattatcttgggtgta
ctgtatggcaagtga
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