Triticum dicoccoides (wild emmer wheat): 119312692
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Entry
119312692 CDS
T07278
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119312692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdc03021
]
119312692
Enzymes [BR:
tdc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119312692
Transcription machinery [BR:
tdc03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
119312692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
DinB
PapD-like
Motif
Other DBs
NCBI-GeneID:
119312692
NCBI-ProteinID:
XP_037444340
LinkDB
All DBs
Position
5B:complement(693490678..693503294)
Genome browser
AA seq
1657 aa
AA seq
DB search
MGPVNANDTCKTCAQQPGDCPGHFGHIELSKPLFNPLLFDTLRDLLRSTCFTCRKFRLSA
QLVDRYARELELLARGDVVQAKNLQDSAVLEESVEMDEDGSVDKPASPSDRMNKTWTSIQ
LKEAHSIFSKLMKKRVNKCANCGMKNPPIKCQIYGWLTIQGTDGSAVRRKAITDYNLEGD
GHISNPNGTGVSGLTDDRVKASSNQTKDLSDDRPLLTTEVESILKDLWEKEARFCMLLCD
FQQNLCVSEKRRGHEMFFLKSMLVPPNRFRPSTSSSLGIMEHPQNVMLSKVQEANLALQH
DNPNHMDILTRWRDLQTSVNLFYDSSKGLGKSGKDGHGVRQLVDKKTGIVRQKIMGKRVN
HSCRTVISPDPFLAVNEIGIPPAAALKLTYPEKVTPWNAKKLQGAISNGSEIHPGATHLK
VNKQTYKLQDDRTKRCGIAKMLAASKGSISQPGKDPKCEFESKVVYRHIQDGDIVLVNRQ
PTLHKPSMMAHVVRVLAGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAINIVD
ANKQYIGPRSGEAVRGLIQDHIVGAVLLTRVGTLLSREEYSQLVYGSCVSSARSPCQSGK
RVSITNDDDTLELLSPAILKPKQLWTGKQVITTILNHLTKGHPPFTVEMEGKIPVQYLTP
KKCDDEDKTISSEKKQKEKAVSSKKKKNEKASAQEQESPEEQKETARAPEEQVLRIHDNQ
LLTGMIDKKQFGNHGIVHTVHELYGADIAGRLLSIFSRLFTLFLQFHGFTCGIDDLLLSQ
ESDKQRTEILAGSEEHSKLAHREFICTGDGDIKDQVKLQMDVEKVVRRIGEPANVALDKK
ILSVLNELTTKVNKTMFPYGLQKPFPRNCLTLMTATGAKGSDVNMTQISSLLGSQDLEGA
RVPRMSSGKSLPCFPPWDTNTRAGGFVSDRFLTGLRPQEYYFHCMAGRNGLIDTAVKTSR
SGYLQRCLIKSLESLFVSYDHTVRNVDGSIIQFCYGEDGVDVHKSSFLNNFEELRNNRTA
VFHRLERYSDELEIYSRDPLLLKPKHITKLPEGLTNRATDFLRNQCPCLKKLKFKECRCR
YRIEEEELTKLLKVKYMASLVDPGEAVGVILAQSLGEPSTQMTLNTFHLAGRGDMNVTLG
MPRIQEILMKASANISTPVMVCPLREDIPRDEAKRLETKLRGIRLADIVEGMEVCTIPFH
NSNGHISSLYKLQLKLFSPECYPPESELTVDECQTALRTVFVDAMEYAIEKHVNFLHKVS
GIQETRVKDTETSPSDGPEEFESRPIDGEESGASDGDDGNDDDLGADAEKRKRQENDEME
YDDDIGEEDGMNSDPEEETKYELDNEDGPAESGEESEENDEGHLSDSSNKTAKLESRLAA
GKLKKGKKETVENLEEQKQEQITQKRSKKLKLTVHVESTDLKFEVHYILHKEPHILLSQI
AQKTLKSLFVSASHNKSISECTVVWPEEKGDSTTKKKKGDSTTKKKKKDDSSQEEEKKND
STNKNKLQTSGVDFEVFWDLQDYLDIHKLTSNDIHAILNTYGVEAARATIINEVKAVFEP
FGIKVDPRHLSLAADFMTSGGSYRPMNSLGMARFCTSPFGKMSFEQATRFIMEAAYHGEV
DKLTGPSATVSLGKPAKTGTGAFGLMQNITLEERAVM
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atgggccccgtcaacgccaacgacacctgcaagacctgcgcgcagcagcccggcgactgc
ccgggccacttcggccacatcgagctctccaagccgctcttcaacccgctgctcttcgac
accctccgggacctcctccgctccacctgcttcacctgccgcaagttccgcctcagcgcc
cagctggttgacaggtacgcccgcgagcttgagctgctggcgaggggcgatgttgtgcag
gccaagaacttgcaagattccgctgttttggaggaaagcgtcgaaatggacgaggacggt
tcggttgataaaccggcgtccccttctgaccgaatgaacaaaacctggacatccatccag
ttgaaagaggcccattctatcttctccaagctgatgaaaaagcgggtgaacaagtgtgca
aactgcggcatgaagaacccgcccatcaaatgccagatatatggttggctcaccattcag
ggtacagatggttctgctgtaagaagaaaagcaatcactgattataatcttgaaggagat
ggccatatttccaacccaaatggaactggtgtttctggtcttacggatgatagagttaaa
gcatcaagcaatcaaacaaaagacctttctgatgatagacctctcttgactacggaggtt
gaatctattctcaaagacctgtgggaaaaggaagccaggttctgcatgttactatgcgac
tttcagcagaatttatgtgtatcagaaaagaggaggggccatgagatgtttttcttgaag
agtatgcttgtgccaccaaatagattccgtccctcaactagctctagccttggaattatg
gaacatccacaaaatgttatgctaagtaaagtgcaagaggccaatcttgcgctacagcat
gacaatcctaatcacatggatattcttacaagatggagagatctgcaaacaagtgtaaat
ttattttacgatagtagtaaaggccttggaaaaagcgggaaagatggtcatggtgtccga
caattggtggataagaaaactgggattgttcgacagaaaataatgggcaagagagttaat
cattcctgccgtacggttatatctccggatccctttttagctgttaacgaaattgggatt
cctcctgctgctgctttaaagctgacttaccctgagaaagtgacgccctggaatgccaaa
aagctacaaggagctataagtaatggctcggaaattcatcctggtgcgacacacttgaag
gttaacaagcaaacgtataaattacaggatgaccgtaccaaacgttgtggcattgctaag
atgttggctgcttctaaaggatcaatttctcaaccagggaaggaccctaaatgtgaattt
gaaagcaaagttgtatatcgacatattcaagatggtgacattgtactggtcaacagacag
cctactcttcacaagcccagcatgatggcccatgttgttcgtgtgttggctggagagaag
acaattcgaatgcactatgccaattgcagcacatacaatgctgattttgatggggacgaa
atgaatgtgcacttcccgcaagatgaaatatctcgcgctgaagccatcaacatcgttgat
gcaaataagcagtacattggtccaaggagtggggaggctgtcagaggtctcattcaggac
cacatagttggtgccgttcttctcacaagagtgggcactctcttaagccgtgaggaatat
agtcagcttgtctatgggtcttgtgtgtcctcagctcgaagtccttgtcaatctggcaaa
agggtatctattacaaatgatgatgatacactggaacttcttagtccagctattttgaag
ccaaagcagctgtggacgggaaaacaggtcataacaaccatcttgaaccatttaacaaaa
ggtcacccaccatttactgtggagatggaagggaagattccagtacagtatctaacacct
aaaaaatgcgatgatgaagataagactatttcctcagaaaagaagcaaaaagaaaaagct
gtttcctcaaaaaagaagaaaaatgaaaaggctagtgctcaagaacaagaatctcctgaa
gaacaaaaagaaacggctagagctcctgaagaacaagttttacgtattcatgataatcag
ctcctaacaggcatgatagataagaagcagttcgggaaccatgggatagttcatacagtt
catgaactctatggcgcagatatagctggaagattgctctcgatattcagccgcttgttt
acattgttcttgcagtttcatggatttacttgtggaatagatgatcttttactatcccaa
gagtcagataagcagaggacggaaattctggcaggaagtgaggaacacagtaaactagcc
catagggaatttatatgcactggagatggtgatattaaagatcaagtgaaattgcaaatg
gatgtcgaaaaggttgtacggagaataggagaacccgcgaatgtcgcgttggataaaaag
attttaagtgtactaaatgagttaacaactaaagtcaataaaaccatgtttccatatggt
ctacaaaagccctttcctagaaattgtctcactcttatgactgcaactggagcaaagggt
agcgatgttaacatgacacaaatctcatcattgttaggctcacaagatttagaaggagcg
cgtgttccacgaatgtcatctgggaagtcattaccatgctttccgccatgggatactaat
acaagagctggtggtttcgtcagtgacagatttttaactggtctccgccctcaagagtac
tatttccattgtatggctggcagaaatgggttgattgacacagctgtcaaaacatctcgt
agtggatatcttcagcgttgtcttatcaaaagtcttgaatcattgtttgtttcgtacgat
cacactgtgcgtaatgttgatggatcaatcatacaattctgctacggagaagatggcgtt
gatgtccataaaagtagctttctcaataactttgaagaactacgaaataatagaacagcc
gtgtttcacaggcttgagaggtacagtgacgagcttgagatctacagtcgtgatcccctt
ctattaaagcccaaacacattactaaactgcctgaaggactcaccaaccgtgcaacggac
tttcttagaaatcagtgtccctgccttaaaaagcttaagtttaaagagtgtcgctgccgg
tatcgcatagaggaggaggaactaacgaagttactgaaagtcaaatacatggctagtctt
gtcgatcctggtgaagctgttggtgtgatccttgctcagtccttgggagaaccttcaaca
cagatgacgctcaacacctttcatcttgctggaagaggtgacatgaatgttacacttggg
atgcctcggatacaagaaatcctaatgaaagcatcagctaacattagtacgcctgttatg
gtgtgccctctgcgtgaagatatccccagggatgaagctaaacgtctggaaacaaaatta
aggggcattaggttggctgatatcgtggagggaatggaagtatgcacaattccttttcac
aacagtaatgggcatatttcgagtctctacaagttgcagctaaaactattctcaccagag
tgttaccctcctgagtcagaacttacagttgatgagtgtcaaacagccttgagaactgtg
tttgttgatgcaatggaatatgcaattgaaaaacacgtaaattttctacacaaagttagt
ggaatccaggaaactagggtaaaggacactgagacctcaccatcagatggtcctgaagaa
ttcgaaagcagacctattgatggtgaagaatctggtgcgagtgatggcgacgatggaaat
gacgatgacttgggagctgatgcagaaaagaggaaacgacaagagaatgatgagatggag
tatgatgatgatattggagaggaagatggtatgaacagtgaccctgaagaagagacaaaa
tatgaactcgataatgaggatggtccggctgagtctggtgaagaatcagaagagaatgat
gaagggcatttgtcagattccagtaacaagacagcgaaattggaaagtaggcttgcagct
ggtaaactaaagaaaggaaaaaaggaaaccgtggaaaacttggaggagcagaagcaggaa
caaataacccagaaacgcagcaagaagctaaagctgactgttcatgttgaaagcacagat
ttaaaatttgaggttcactacatcttgcacaaggaaccacatattttactatcccagatt
gcccagaagacattgaagtccctatttgtcagtgcatcccataacaaaagcatcagtgaa
tgcacagttgtttggccggaggagaaaggcgattccaccactaaaaagaagaaaggcgat
tccaccactaaaaagaagaagaaagatgattcctctcaagaagaagagaagaagaacgat
tccactaataaaaataaactgcaaacatcaggagtggactttgaggtattctgggatctg
caggactacctggacatccacaagcttacatctaacgacatacatgccatcttgaataca
tacggggtagaggctgcaagggccaccatcattaacgaggtgaaggccgtgtttgagccc
tttggcatcaaggtagacccgaggcacctgagcctggctgctgatttcatgacctcagga
ggctcctaccgaccgatgaacagcctcgggatggcccggttctgcacgtcgccgtttggc
aagatgagcttcgagcaggccacgaggttcatcatggaggcggcctaccatggggaggtg
gacaagctcacgggcccttcggcgaccgtgtccctggggaaaccggccaagaccgggacc
ggtgcctttgggctgatgcagaatatcaccctggaggagcgggcggtgatgtag
DBGET
integrated database retrieval system
