Triticum dicoccoides (wild emmer wheat): 119312721
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Entry
119312721 CDS
T07278
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170-like isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119312721
Enzymes [BR:
tdc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119312721
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119312721
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_3
zf-C3HC4
zf-RING_5
zf-C3HC4_4
zf-C3HC4_2
zf-RING_2
zf-RING_6
DUF6274
Motif
Other DBs
NCBI-GeneID:
119312721
NCBI-ProteinID:
XP_037444379
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All DBs
Position
5B:696106419..696109535
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AA seq
197 aa
AA seq
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MSSAAAAASSSASPVPPEDDVCSVCHDRFRIPCQANCSHWFCGECIIRVWNHGAAVQPCK
CPICRRLINLLVPANVSDDQNDDPQLQRVLGEIQHYNHIFGGAPRSLTQRLQDLPFFIRR
LFRELMDPQRTLPLVFRARMILMVILSGVYVLSPVDILPESVLGLFGFFDDFLILVIVFL
HLAAVYRSLLLYRHGGH
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgagctccgccgccgccgccgcctcctcgtctgcgtcgccggtgccgccggaggacgac
gtctgctccgtctgccacgaccgcttccggatcccctgccaggccaactgctcccactgg
ttctgcggagagtgcatcatccgtgtttggaaccatggagctgctgtacagccttgcaag
tgtcccatttgccgtcgccttataaatctgctggtacctgctaatgtatcagacgatcag
aatgatgatccccaacttcagcgtgttttgggagagattcagcactacaatcacatattt
ggtggagcaccacgcagcctaacccagaggctgcaagacctgccgtttttcatacgaagg
ctgttcagagaactaatggatccccagaggaccctcccacttgtattcagggcgaggatg
attctgatggtgatcctgagtggggtgtacgtcctgagcccggtcgacatcctcccagaa
agcgtgctggggctgtttgggttctttgacgacttcctcatcctggtgatcgtgttcctc
cacctcgcggccgtgtaccggtcgctgctcctgtaccgccatggcggccactga
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