Triticum dicoccoides (wild emmer wheat): 119312978
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Entry
119312978 CDS
T07278
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80-like
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
119312978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119312978
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
119312978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
VWA
Motif
Other DBs
NCBI-GeneID:
119312978
NCBI-ProteinID:
XP_037444675
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All DBs
Position
5B:complement(720312705..720318735)
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AA seq
739 aa
AA seq
DB search
MPPPPRPLSRTRNRRRRTRRRPRREPGFPTPRGMARNKEGLVLLLDVGPSMHRALQEVEN
VCTTLVRKKLVFHRSDEVGVVLFGTKETHNDLARELGGYKHVLVKHDIKVVDEETKDALE
NLPKGTAPGDFLDAIVVGLDMLIKRFGDTKAKQRLCLITDAQHLLRDPPQGTKEDQVDTI
ADQMKKHDIKMDCIVFRESGVQHNSVMDENDRLLYQFRDRSVAKVVQVDTPTALLGALKT
RNVLPVTIFRGDLEVSSTFKIKVWAYKKTSEEKFPTLKKYSDKAPPSDQFASHEVKVDYE
YKSILEPDTVVPPDQRIKGYLYGPQVVPISSAEWEAVKFKPEKGVKLLGFADRSSIPRSY
FMKDVNSFVPEPGNTKAIVAVSALARAMQETNKVAILRCVWRQNQANVAFGVLTPNISSV
NNVPDSFYFNILPFAEDIRDFPFRSFSSLPPSSQPTEEQQEAADNLVKMLDLAPPGREEI
LRPDFTPNPMLERFYSYLDLKSKQPDANPPPLDSCLRRITEPDPDVINYRAPLIQNLGKS
FELKENPKRKKARTQERLAYTDPDDQAKSSENNAEKATAADGQAKKPEDPYAEKARAIEV
LFPSTEKVGKIGDANPVKDFEAMLAERSSSTWVQKAIEEMKKYTTNLVQNSLQGDYYEKA
LECFVALRKACIIEQEPEEYNQFVIKLYERLKKVNDVVKFFQLLSSKNVLLICKEEAPDS
DVTEEMARSFFMKTEISSE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgccgccgcgccccctttccagaacacggaaccgtcgccgtcgcacgcgccgc
cggccgcgccgcgagcccggtttccccacgccccgcggcatggcgcgcaacaaggagggg
ctggttctgctgctggatgtcggcccgtcgatgcaccgggcgctgcaggaggtcgagaac
gtctgcaccaccctcgtgcgcaagaagctggtttttcataggagcgacgaggttggcgtt
gtcctgtttggaactaaagaaacacacaatgacctcgcgagggaacttgggggctataag
catgtgctggttaagcacgatattaaagttgttgacgaagaaacaaaagatgcccttgaa
aatcttcctaagggaactgcccctggtgactttctggatgctattgttgttggtttggat
atgctgataaagagattcggagataccaaagcaaagcaacgtctgtgtctaatcaccgac
gcacaacatctgctaagggatccgccccaagggacaaaagaagatcaggtggacactatt
gcagaccagatgaaaaaacatgatattaagatggactgcattgttttcagggaatctggg
gttcaacacaattctgtaatggatgaaaatgaccgattattatatcaattcagagatagg
tccgtggcaaaggtagtccaggttgacaccccgacagcactcttaggtgctctcaagaca
agaaatgtactcccagttactatcttcaggggagacctggaagtgagctccacttttaaa
atcaaggtgtgggcctataagaaaacatctgaggagaaattccccactttgaagaagtat
tctgataaggctcctccaagtgatcagtttgcctcgcatgaagtcaaagtggattatgag
tacaaaagcattctagaaccagacacagttgttccaccagatcaaagaatcaagggctat
ctttatggtcctcaagttgttcctatatcatctgctgagtgggaggctgtgaagttcaag
ccagagaaaggtgtgaagcttctaggttttgcagatagatccagcataccacggtcctat
tttatgaaagatgtgaactcctttgtacctgaaccgggaaacacaaaagcaattgttgca
gtctctgccttagctagagcaatgcaagaaacgaacaaggttgcaattctgcgatgtgtg
tggaggcaaaatcaagcgaatgtcgcttttggtgtgttgacacctaacatctcatcagtg
aacaatgtgccagattccttttacttcaatatactgccttttgctgaggacatcagagat
tttccgtttcgctccttcagcagcctgccaccatcatcacagcctactgaagaacagcag
gaagcggcagataacctagtgaagatgttagaccttgcaccacctggaagggaagagatc
ctcaggcctgatttcacaccaaatcccatgttggagaggttctacagctaccttgatctg
aagtcaaagcagccagatgcaaatccaccaccgctcgatagctgtctaaggaggataacc
gagccagatcctgacgtcattaattatcgagcaccgttaatccaaaatttaggcaaatct
ttcgaactgaaggagaaccccaagagaaagaaagcccggacacaggagagattagcttat
actgacccagatgatcaagctaaaagttcagaaaataatgcagagaaggctacggcggca
gatggtcaagctaaaaagccagaggatccttatgcagagaaggctagggcgatagaggtt
ctgtttccttcaacggagaaggttgggaagattggagatgcaaatcctgttaaagatttt
gaagccatgctggcagagagatctagctcaacatgggttcagaaggcaattgaagagatg
aagaagtacacgaccaatttggtacagaattctcttcaaggagattattacgaaaaggca
ctcgagtgttttgttgctctgcggaaggcctgtataatcgaacaggagccggaggaatat
aaccagtttgtgattaagctttatgagagactgaagaaggtgaatgatgtggtgaaattc
tttcagcttctttcatccaagaatgttttgcttatatgcaaagaagaagcgcctgacagc
gatgtgactgaagagatggcgaggagcttcttcatgaaaaccgaaatatcctctgagtag
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