Triticum dicoccoides (wild emmer wheat): 119313013
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Entry
119313013 CDS
T07278
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdc03021
]
119313013
Transcription machinery [BR:
tdc03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
119313013
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
Motif
Other DBs
NCBI-GeneID:
119313013
NCBI-ProteinID:
XP_037444717
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All DBs
Position
5B:complement(722799073..722816762)
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AA seq
1901 aa
AA seq
DB search
MWTNIFKIGELQTVSWFQFLPVEPDYSATSDRSSKAKQKDALNSTVLSAYLRLQNEGFLS
TWTNSFVGPWDPSQGEHNPDEKIKLWLFLSGRHSSVPEMTQPAVAKLRVVSSGLWVAPGN
SEEVAAALCQALRNSLERALRGLSYARFGDVFTKYTPPTRNQNSFRRAQPTVEFVFAATE
EAIFVHVIISARYMRNLSSDDIEKVLTHTPRSVGEGLPVIVAPSGMLGRLVGCCPSDLAR
QVYSSKLSAPNLPGFTQPTICQLRGQSYYVEVALGFPPTSTDKTSESENNQIKKELDSVN
DPHLGADGQQKLESAEGLPALERTFIYPPEAVMVPMVHQAFVHFSSKRMWSQDWMGSSSW
EAWPFWNFSPSSYFRNSSFFGSSRGLGVNSNFLRLRRQRNSNSNGMASSISSVSSTSNGS
GHAVAAKGGDLLADADSAACRQSDLPLNNDIAGSKVVSKRSRSEITEVSSHAGKEVRENM
QGTNGQGGCSWGWGEEGVVMDIDILLSEFGDFSDFFQEDELDFGEPPGTAESHALVTPAS
EYGDMPFIDSPSIAMDIPEQRLSPVGFTSMEAFSHHTMSPIQDVASKVQEPLKEIASPAV
SQSFVLSSSRSDFLTRAEATLTFAPEYAAVEISSCETPATLFTNPYLPRSKKRGSCGFSS
RVYSYDVTQSSKVESAGDKSEKSDKLTPANLSRDVGRSSLYTLVQGRKNESEKSLNNADE
QSCKGETSRPVSGETSFSSSLTLQKKSDNMLNVGYFLLSMKTALATEIECITFQAAMCRI
RHTLVSLRTKASAELKSALSSAMQTESSSNSDLVPKYDMKRKESIPARLSSDVDHEMCDR
SRLENVGVWRSVVVPKGAKPLDSLSAKTFSGTSPSVQRQPIVELLSAMALLVQQSTSFVD
IALDMDDGDGSFFWLSLDEQRRRGFSCDPSMVHAGCGGLLGTCHSKDCAGVDLVDPLSAE
VSESSMIGLLQSDIKSALKTAFANMDGPLSVIDWCRGRSNIAESAAMGDAYSFHYTTGDI
RETSNSIPIGGDAMSPPQSSSDRGTSEEHHKGYHRVRPTIAVLPSPSLLVGYQDDWLKTS
ANCLKLWEKAPLEPYASAKPVTYYALCPDIDLLTSAATDFFMQLGTIYEVCKLGTHSPQH
SGGQIEQSPGKYQSSGLVLVECPDQLKSSGSHSVSISSVTEYFQALSKSWSVRSFLSSLA
RIIKDIKLTLNISTNQKESSNIPCTVVYVVCPFPEPSAVLQTLVESSVALGSILSSERER
KSFLYAQVAKALNSSASADEASASNVVMLSGFSIPKLVLQIVTVETLLRLNKPNELAAFK
DIAFTVYNKARRIPRFVSTSDMFQSPTYMSRPQSTMMHTASPGPTLWKECLAPRMSGQTL
SRETEFDASMRSVSWDNSWQPGRAVGLPDPSKIPELCAQDDRKYAFEPLFILAEPGAVDY
NDTMESSRFGVDASSSRAYSSISGGTDSGANPLLEGSENDSAPSLHCCYGWTEDWRWLVC
IWTDSRGELLDSLIFPFGGISSRQDTTVLQSLFIQILQQGCQIMSSSPEASNTRSRDIII
TRIGGFLELEIQEWQKAIYSFGGNEVKKWPVQLRRSIPDGITSNSNGPTLEQQDMGLIQD
RNMPSSPSTLYSPHSKSSFTKGQPGNKKQILAEQTGMDSSRGSLHLVRSISLVAVSQDSS
LHLACQADLLATRPTSGEGNQSSGTGSSSYLDGFAPVKSIGSMSASYLLVPSPSMRYLSP
ATLQLPTCLTSESPPLAHLLHSKGTATPLAMGYVVSKAVPPVRKNAVQLTKEDSRHSVLS
VSIVDYYGGTVQERMSRGVGSMSKQAVRHETSARDYETDMHNVLEAVAAELHSLSWMTVS
PVYMERRSALPFHCDMVLRLRRLLHYADRHLSQPTDKGDVS
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atgtggaccaacattttcaaaattggggagcttcagactgtatcatggtttcaatttctt
cctgttgaaccagattatagtgctacttctgatagaagttcaaaagccaagcagaaagat
gctcttaatagcactgtgctgtcagcgtatcttcgcttgcagaatgaaggtttcttaagt
acttggacaaattcttttgttggtccttgggatccatctcaaggagagcataaccctgat
gagaagatcaagctctggttgtttctttctggccgtcactcgtcagtacctgaaatgacc
cagcccgctgtagctaaattaagagttgtttcaagtggtttatgggtggctccaggcaac
tcagaagaggttgcagctgcactatgtcaggccttaagaaattctttggagagagcacta
agagggctttcctatgcaagatttggtgatgtatttacaaaatacaccccccctacaaga
aatcaaaatagctttaggcgagcacaacctacagtagaatttgtctttgcggccactgag
gaagcaatctttgtgcatgttattatatctgcaagatatatgcggaacctatctagtgat
gatatagagaaagttctcacacacactccccgttctgttggtgaaggtcttccagttatt
gtcgctcctagtggaatgctgggtaggcttgttggttgttgcccaagtgacctcgcgaga
caagtatattcaagcaaattatcggcacctaatctaccaggtttcactcaacccaccatc
tgccagctgagaggtcaaagttactatgttgaagttgcccttggctttccacctacctca
actgacaaaacttctgaatcggaaaataatcagattaagaaagaattagattcagtgaac
gaccctcatttaggtgctgatgggcagcaaaagttagaatctgctgaaggccttccagct
cttgaaaggacatttatatacccacctgaggctgttatggtaccaatggttcatcaggca
tttgttcacttttctagtaaaagaatgtggtcacaggactggatgggcagttcatcatgg
gaggcttggccattctggaacttctctccgtcttcttacttccggaacagctctttcttt
ggatcttcacgtggacttggtgtgaactctaattttctaagactaagaagacaaaggaat
agcaactccaatggcatggctagtagtatcagtagtgtcagtagcacttctaatggaagt
gggcatgcagttgctgctaaaggtggtgatcttttagcagatgctgactctgcagcatgc
cgtcagtctgatctgccattgaacaatgacattgctggtagcaaggtggtatccaagcgc
tctcgttctgaaataacggaagtttcttctcatgctggcaaagaagttagggaaaacatg
caaggtacaaatggtcaggggggatgttcttggggctggggtgaagagggggttgtgatg
gacatcgatatacttctctcggagtttggagattttagtgacttctttcaagaggatgag
ttagattttggtgagcctccaggtactgctgaatcacatgctttagtaacccctgcttca
gaatatggagacatgccattcatagatagtccatccatagctatggatatacctgaacaa
agactttctcctgttggtttcacatctatggaggcatttagccaccatacgatgtcacct
attcaggatgttgcttctaaagttcaggagcctctcaaagaaattgcatcacctgcagtg
tcccagtcctttgtattatcatctagtagatctgattttctcaccagagctgaagctaca
ctcacgtttgcaccagaatatgcagctgttgaaatttccagttgcgagacgccagcaaca
ctgtttacaaatccctacttgccccgatcgaaaaaaagagggagttgcggttttagctca
agagtttattcatatgatgtcacacaaagttctaaagttgagtctgcaggagacaagtct
gagaagtctgataaactaacaccagctaatctttcacgtgatgttggtcgatcgagctta
tacacgcttgtgcaaggtaggaaaaatgagagtgaaaagagcttaaacaatgcagacgaa
caatcatgcaagggagaaacatcaagacctgtttctggtgaaacttcatttagctcttct
ctgactttgcaaaagaagagtgataacatgcttaatgttgggtatttcctcctatctatg
aagaccgcgcttgcaactgaaattgaatgcatcacatttcaggctgccatgtgcagaata
aggcatacactagtgtctctgagaaccaaagcatctgctgagttaaaaagtgccttgtcc
agtgctatgcagacagagagcagtagtaactcggatcttgtccccaaatatgacatgaaa
aggaaagaaagtataccagctaggctgtctagtgacgttgaccatgaaatgtgtgatagg
tcccgattggaaaacgtgggagtttggaggtctgttgtggtacctaaaggggcaaaaccc
cttgattctttgtccgctaaaacattttctggcacaagcccatctgtacaaagacaacct
attgtggaactcctcagtgccatggctctgctagttcagcaatctacttcatttgttgat
atcgcacttgatatggatgatggagatggttcttttttctggctctccttggatgagcag
aggagacgcggattttcttgtgatccttctatggttcatgctggctgtggtggactatta
ggaacgtgtcattccaaggattgcgctggtgttgatttagttgatccactttctgcagag
gtttcagaatcatccatgattggcttgttgcagtcggatataaaatcagctcttaaaaca
gcgtttgcaaacatggatggcccattatcagtaattgattggtgcaggggtcgaagtaat
atagcagaatctgctgccatgggagatgcatactctttccattatactactggtgatatt
cgagagacttcaaattctatacccattggtggagatgcaatgagcccaccccagtctagc
agtgatcgaggcacttcagaggagcatcataagggatatcaccgtgttagaccaaccatc
gccgtcctcccttcgccatctcttcttgttggttatcaggatgattggttaaagacctct
gctaattgcctcaagttgtgggagaaggctcctttggaaccttatgcttcggccaagcct
gttacttactatgcactgtgccccgatattgatttgcttacttctgcagcgactgatttt
ttcatgcagcttggaacaatttatgaagtttgcaaactgggtactcattcgccacaacac
agtggggggcaaatagaacaatctcctggaaaatatcagtcttcaggacttgttctcgtt
gagtgccctgatcaattgaagtctagtggcagccactcagtttctatcagttcagtaact
gaatactttcaagctctttcaaaaagttggagtgtgagaagttttttatcatctctggca
aggataattaaggatataaagcttactttaaacatttcaacaaatcagaaagagagcagt
aacataccttgcactgtagtttatgtggtctgcccatttcctgaaccatctgcagtccta
cagacactggtagaaagttctgttgcccttgggtctatcttatcgtcagagagagaaagg
aaatcattcctatatgctcaggtcgccaaagctctaaacagcagtgcttctgctgatgaa
gcatcagcatccaatgttgtaatgctctctgggttcagtataccgaagcttgtcttgcag
attgttactgttgaaactttactgagactcaataaaccaaatgagctggctgctttcaag
gacatagctttcactgtgtacaataaggctcgacggatcccgcggtttgtttccacgagt
gacatgttccagtcacctacttatatgagtaggcctcagtcgacgatgatgcatactgca
tctcctggtcctaccctttggaaagaatgtctagctcctcggatgtctggacaaactctc
tctagagaaacagagtttgatgcatccatgaggtcagtatcatgggacaactcatggcaa
cctggccgtgctgtaggattgcctgatccaagcaaaatccctgaattatgcgctcaggat
gacaggaagtatgcctttgagccgcttttcattctggcagagcctggggctgttgattac
aatgatacaatggaatcttcaagatttggagttgatgcaagtagcagcagggcttacagc
tcaatttcaggtggcactgatagtggagcaaacccgctacttgaagggtctgagaatgac
agtgctccgagtcttcattgctgttatggctggaccgaggactggcgatggttagtatgc
atctggacagattctagaggagagttattagacagcttaatatttccttttggtggtatt
agtagccgccaggacactacagttctccaaagcctattcattcaaattctgcagcagggt
tgtcaaataatgtcttcttcaccagaggctagcaatacgagatcaagagatataataata
acccgtattggaggtttccttgaacttgaaatccaggagtggcaaaaggcaatatattct
tttggtggtaacgaggtaaagaagtggcctgtgcagctacggcgatctatacctgatggt
attacgtcaaattctaatggaccaacactcgagcaacaagatatgggcttaatccaggac
agaaacatgccttcctcaccaagtacattatacagcccccattcaaaatctagcttcacg
aaaggtcagccaggcaacaaaaagcagatcctagcggaacaaactggaatggacagttca
aggggttcattgcacttggttcgtagcatcagtttggttgcagtttcgcaagatagctca
ttgcatcttgcatgccaagcggatctgctggcaaccagacctacttctggtgaagggaat
caaagcagcggcactgggtcatctagttacttagacgggtttgccccagtcaagtccatc
gggtcaatgtctgcatcatatcttcttgttccatcaccaagtatgcgatatctttcccct
gcgacattacagcttccaacgtgccttacatcggaatccccaccacttgcccacctattg
cacagcaaagggacagcaactcccttggcaatgggttatgtcgtctccaaagctgtccca
ccagtaagaaagaatgccgtgcaactcaccaaggaggacagcaggcactcggttctctct
gttagcatcgtcgattactatggaggcactgtccaagagaggatgagcagaggggttggc
agcatgagcaagcaggctgtaaggcatgaaacatcagcccgtgattacgaaacggacatg
cacaacgtgttggaagcggtggctgcggagctccactccctttcgtggatgacagtaagc
ccggtctacatggaaaggcgcagcgctctccccttccactgtgatatggttctgaggttg
aggagacttctccactacgccgatcggcatctctctcagccaacagacaagggagatgtt
agctag
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