Triticum dicoccoides (wild emmer wheat): 119314470
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Entry
119314470 CDS
T07278
Name
(RefSeq) histone deacetylase complex subunit SAP18-like
KO
K14324
histone deacetylase complex subunit SAP18
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03013
Nucleocytoplasmic transport
tdc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119314470
03015 mRNA surveillance pathway
119314470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119314470
03036 Chromosome and associated proteins [BR:
tdc03036
]
119314470
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119314470
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
119314470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP18
DUF6752
Motif
Other DBs
NCBI-GeneID:
119314470
NCBI-ProteinID:
XP_037445087
LinkDB
All DBs
Position
6A:39145802..39149410
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AA seq
150 aa
AA seq
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MAGMGEMSMRPRPGPPMHRGPPPMARPRPEPIDREKTCPLLLRVFTKVGGHHLNEEFSER
GKEPKDEVQIYTWKDATLRELTDLVKEVALPARKRNARLSFAFVYPDKNGRFVVKQVGST
FSYGHGRGDDAKSLGDLGFQIGDYLSVSIM
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcatgggcgagatgtcgatgaggccgcggccgggcccgccgatgcaccgcggc
ccgcctcccatggcgcgcccccgccccgaacccatcgaccgcgagaagacctgccctctc
ctgctccgggttttcaccaaggttggtggccatcacctaaatgaagaattttctgagaga
gggaaggagccaaaagatgaagttcagatttacacgtggaaggatgccacactccgggag
ctcactgatcttgtcaaagaggttgctcttccagcaaggaaaagaaacgctaggttatct
tttgcttttgtatacccggataagaatggccgttttgttgtcaaacaggtgggttcgacc
ttttcatatggtcatggaagaggggatgatgccaaatctcttggggatcttggcttccag
ataggtgattacttgagcgtgtcgatcatgtga
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