Triticum dicoccoides (wild emmer wheat): 119314796
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Entry
119314796 CDS
T07278
Name
(RefSeq) uncharacterized protein LOC119314796 isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119314796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdc04131
]
119314796
Membrane trafficking [BR:
tdc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
119314796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
Beta-prop_EML_2
VPS8_N
Beta-prop_EML
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_HPS5
WDR55
ANAPC4_WD40
TPR_Vps41
Clathrin
TPR_VPS8_2
WD40_Prp19
WD40
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
zf-RING_2
DUF2139
Beta-prop_WDR90_POC16_2nd
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
119314796
NCBI-ProteinID:
XP_037445370
LinkDB
All DBs
Position
6A:complement(55676951..55690621)
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AA seq
1920 aa
AA seq
DB search
MPSSSPAMATQPPPRTPAQELDLDAFLPSSPASSSTSDADADHRRAVDDLLLLLSSSDSE
GDDEPTRTPATNLKPLTRIKAPPPPPKPSPPSPLPSPSASPGRSTSASPSATLSSLVSRT
FSSNAASSSTSSARPLPSLFRGVRPSPKPGAALAAAAAASRAVLTPHAAAIKSRRTASAP
IEKLLDEGSGSGSEASEGILSAGNFEAEEVAEKVSEEVVARVTEEAVGGSAGEELAEDKH
GEVGTEENFEPSELRDLGNVDSVAVENANEQEQLGGENLAETYQVGNQIGLVDEENSDEQ
LSDGNLAEYGEIVDQDGSVSEEKTDDGLEVERSDTDLEEQLESERIIDKVIEERLEISRM
AEKNAEKRPKLPMKPLERAEELEKRQASFGQHWEEGAAAQPMHLEGIGKGQPAIGYMQIE
ADNPITRAMASPSFRQDHGSPQVLAVHRSYIAMGMSTGSVIIVPSKYSIHQADDTDAKMQ
FFWNQGEKTQSPVTAMCFNPQGDLLLVGYGDGHMTIWDVQKATAAKVIYGEHTGAVVHVC
FIRQSKAITGDSKGLVLLHTFSIIPVINRLTVKGTQRLFDGNTGIVLSACPLLADESFGS
GNSSTQGNLPTSSSGGLGSMMGGVVGVDSGWKFFNEGSSPLEDGVTVMFIMHQHALVVRL
RTNIDHIENFSRPEGAREGSIAYAAWKYTSPSTDSSLIDEERVSWLALAWDRQVQVAKFV
KSKMIRHKDWKLDSAAVGVAWLNDQMLAVLNLKGQLCLFSKDGSELRRTIFILDGFVFDD
SILYHTHFSNRFGNPERHFNNSVAVRGATVYILGPSFLTVSRLLPWKERIEALKMAGDWM
GALDMAMKLYDGHTQGVVDLPRTVDSIRGAIMPYLVELLLSYIGYVFEYISIALSNHTGK
GGAADGLIDADRSLLTQREEQYARVGGVAVEFCVHIGRNDILFDTVFSKFVAAQSGGIFL
EVLEPYILKDMLGSLPPEIMQALVEHYSGKGWLQRVEQCILHMDISSLDFNQVVRLCREH
GLYGALIYLFNQGLNDFRTPLEELLSVIQNATRKDATSTCYRMLVYLKYCFQGLAFPPGH
GRIPRAQLHAVRKELLRFMLEDSKMLTSEVFKGFSSSSGKCPNICYLLWMDTEATLEVVK
CAFAQENFESTSSTLDASVSKDEEDTDIQSPDSQNILLQSVVDTIIHIVGLENEAIHSVV
VGTAESEESELWPSVNDFGHIIEFVSFFVSHKRANASQRVLKHILKYLTSSTTSYDDKKM
PPQKEVLQLFNVVPQTDWNSDYVLNLCLDAHFHQACGMIYTARNQNLAALDSYMKDTMEP
YHAFIFINKKLLQLASDEALSFRSTVISRFAELVNLSRECAFVLVIDHFHDEIQQILAEL
HSDHRSLFLFLKTAIEVHLSGKLDFSELTARNYEIVESLYSGELEDYLQRLSNLPKLFDR
NPISMTDKLVELYLELLCQYEPRSVLKFLETFDSYRLERCLLLCLDYGVTDAAAFLQERV
GDVASALELVLAGLDEKVNQFIASVENAFSRTSSKSISEIEQPDIVLNMSEARPVLDVLR
SSIGLCQRNSQRLDPEESQLHWFQLVDSFSDPLKKLYGSKVVNGKGCWSVGGETTNGHPT
GKGFSQKMVNSAYQRCLNTLRRVFSQFVGEIIEAMSGYIPLPAIMAKLLSDNGSQEFGDF
KLVIHRMLSMYLYEKRILETAKSVIEDDSFYTLSLLKRGVCHGFAPQTFVCCVCNCSLSK
EGAISAVRVFSCGHATHLHCESEQSKSSNKDFKDGCPVCLSMSDTQARNKSPIIAENGLP
NYPVVEHEVPYGVHHNHETDHVERSRGLHQMSRFEILNNLQKGQKSFHIETVPPLKLSPP
AIYHEKIQKRVSLVGESSRHSVRSEKTQKIWHMKEPKSKKSGNWLPPKSSIFSSDKNQVR
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgtcgtcgccggcgatggcaacccagccaccgccgcggacaccggctcaggag
ctcgacctcgacgccttcctcccgtcgtctcccgcctcctcctcaacctccgacgccgac
gccgatcaccgccgcgccgtcgacgacctgctcctcctcctctcctcctccgactccgaa
ggcgacgacgagccaacccgtacgcccgccaccaacctcaaacccctaacccgtatcaaa
gccccaccgccgccccctaaaccttctcccccatctcctctgccatcgccttccgcttcc
cccgggagatccacatccgcatcgccgtcggcgacgctctcctccctcgtctcgagaacc
ttttcgagcaacgctgcttcctcatccacctcctcggcgaggccgctcccctcgctcttc
cggggtgtccgccccagccccaagcccggcgccgccctggccgcggcggcagccgcgtcc
cgcgccgttctcaccccgcacgccgctgcaattaagtcgcggcgcaccgcctccgcgccc
atcgagaagctccttgacgagggctccggctccggctccgaagcctcggaggggatcctt
tccgctggaaatttcgaagcagaggaagtagctgagaaggtcagtgaggaagtggttgct
agggtgaccgaggaagctgtcggtgggagtgcgggtgaagaattggcagaggacaagcat
ggggaagttgggactgaagagaatttcgagccctccgaattgcgagacctaggcaatgtc
gactctgttgctgtggagaatgccaatgagcaggagcaacttgggggcgagaatttggca
gaaacatatcaagttgggaatcaaattgggcttgttgatgaagaaaatagtgatgaacaa
cttagtgatggaaatttagcggaatatggtgagattgtggatcaagatgggtcagtttcc
gaggaaaagactgatgatggtctggaagttgaacgttctgacactgatttggaagagcaa
ctggaatctgagcgcatcattgataaggtgatcgaagagaggttggagatcagcaggatg
gctgaaaaaaatgcggagaaaaggccgaagttaccgatgaaaccattggagcgggctgag
gagcttgagaagagacaggcctcatttgggcagcactgggaggagggagcagcagcgcaa
cccatgcacctggaggggattgggaaggggcaaccagctattggttacatgcagattgag
gcggacaacccaataactcgtgccatggcatctccgtcttttagacaggaccatggctct
ccccaggtcttagcagtacataggagctatattgccatgggcatgtccactggatctgtt
atcatcgtcccaagcaaatactccatccatcaagctgatgatacagatgcaaagatgcag
ttcttttggaaccaaggtgagaaaacccaatcaccagtgactgccatgtgctttaaccca
caaggggatcttctgctagtaggatatggtgatggtcatatgacaatttgggatgtacag
aaggctactgcagcaaaagttatatatggtgaacatacaggagctgtagtgcatgtttgt
tttatccgccaatctaaagccatcactggtgattcaaaagggcttgttcttctgcacaca
ttctctattatccccgtcattaatcgcttgactgttaagggaacccagcgcctttttgat
ggaaacactggaatcgtgctctcagcctgtcctcttctagcggatgaatcctttggttct
ggcaactcatctacgcagggcaacctaccaacttcctccagtggtggtcttgggagcatg
atgggaggtgtagttggagtagattctggatggaagtttttcaatgaaggttcttctcca
ttggaggatggtgttacagtcatgttcattatgcatcaacacgctcttgtggttagactc
cgtaccaacattgaccatattgagaacttttctagaccagaaggagcacgtgaagggtca
attgcttatgctgcatggaaatacacatcgccctccactgattcatcgctgattgatgaa
gagcgggtatcttggcttgcgcttgcatgggaccgtcaagtacaagttgcaaaatttgtt
aaatcgaagatgatcagacataaggactggaagcttgatagtgccgctgttggcgttgcc
tggttaaatgatcagatgttagctgtccttaacttgaaagggcagctctgtttgttctca
aaagatggcagtgagcttcgcaggactatctttattcttgatggttttgtcttcgatgac
agcatactgtaccatacacatttttctaacaggtttggcaatcctgagaggcattttaac
aactcagtagcagtgagaggtgctacagtatatattcttggcccaagctttcttacagtt
tcgcgacttcttccatggaaagagcggattgaagcactaaaaatggctggtgattggatg
ggtgcactggacatggcgatgaagctttatgacggtcacacacagggtgttgttgatctt
ccgagaacagttgattctataaggggagccataatgccgtatttagtagagttgctgctg
tcatatataggttatgtctttgaatatatttcaattgcattgtcaaatcatactggaaag
gggggagcagcagatggcctgatagacgccgatagatccctgctgacacagagagaagaa
caatatgctcgtgtaggaggggttgcagttgagttttgtgttcacattgggcggaatgac
atcctgtttgatacagtcttctctaagtttgttgctgcccaaagtggaggtatatttctg
gaggtactagagccatatatattgaaagatatgctgggttctttaccccctgagatcatg
caagctctagtagagcattatagtggcaaaggatggttgcagcgagtcgagcaatgcatt
cttcatatggatatttcatcactggattttaatcaggtagtcagactgtgtcgtgagcat
gggttatatggtgctctaatttatttatttaaccaagggttgaatgatttccgtacacct
ctggaggaacttctatctgtcatccagaatgctactcgaaaagatgctacttctacttgc
tacagaatgcttgtttatctgaagtattgcttccagggcctagcatttcctccagggcat
ggaagaattccccgagcccaacttcatgcggtgagaaaagaacttctgagattcatgctc
gaggactctaaaatgctcacttctgaagtatttaagggttttagttcttcttctggaaaa
tgcccaaacatatgctatctactatggatggatacggaagctactttggaagttgtcaag
tgtgcttttgcacaagagaattttgaatctacttctagtactcttgatgcatctgtatct
aaggatgaagaagatactgatattcaaagcccagatagtcaaaatattttgttacaaagt
gtagttgacaccatcattcatattgttggtttagaaaatgaggcgatccattccgttgtt
gtgggtactgctgagtccgaagaatcggaactttggccttcagtgaatgacttcggtcat
ataattgaatttgtgtccttttttgtttcccataaaagggcaaatgcatctcaaagagtt
ctcaagcacattcttaaatacctcacgtcatccactacatcatatgatgataaaaaaatg
ccacctcagaaagaagttcttcagctcttcaacgtggttcctcaaactgactggaattct
gattatgtgttgaatctttgtttagatgcccattttcatcaggcctgtggcatgatatat
acagccagaaatcaaaatttggctgctttagatagttacatgaaggatacaatggaacca
taccatgcatttatcttcatcaacaaaaagttacttcaattggcaagtgatgaagctttg
tcgtttcgttccacagtaatatctcgttttgctgagctagtcaatctaagcagggagtgt
gcatttgtcttggtcattgatcattttcatgatgagatccagcaaatattggcagagctt
cattctgatcaccgcagcctctttcttttcttgaaaactgcaatcgaagtacacttgtca
ggaaaacttgacttcagtgaacttactgccagaaactatgaaattgttgaaagtctgtac
tctggagaactcgaagattatcttcagagattatcaaatctcccaaagttgtttgaccgc
aatcctatttctatgactgataagttagttgaactctatctggagcttctgtgtcagtat
gaaccaaggtcagttctgaagtttctggagactttcgatagctacagattggagaggtgt
ttgctcctttgtctagattatggagttacagatgctgctgcatttctgcaagagagagtt
ggtgatgttgcgagcgcgttggaacttgttctagctggactagatgagaaagttaaccag
tttatcgcttcggtggaaaatgcgttctctcggacatcgtcaaagagtatctctgaaatt
gagcaaccagacattgttctaaacatgagcgaggctcgtcctgtgcttgatgtgttacgt
tcctccattggattgtgccaaaggaattcacagcgtttagatccagaggagtctcagtta
cattggtttcaactggttgactctttctcagatccactgaaaaagttgtatggaagcaag
gttgtaaatggaaaaggttgttggtccgtgggtggtgaaacaacaaatggacatccaaca
ggcaaaggattctcacaaaaaatggtgaattcagcttatcaaaggtgtttgaatactctg
cggagagttttctcacaatttgttggagagataattgaggcaatgtctgggtatataccc
ctgccagcaattatggcaaagctattatctgacaatggaagtcaagagtttggtgatttt
aaacttgtcatacatagaatgctgtctatgtatctctatgaaaaaagaatactggaaaca
gctaagtcagttatcgaggatgattcgttctataccttgagcttattaaagagaggggtt
tgtcatggatttgctccacagacttttgtctgttgtgtatgcaactgctcactttctaaa
gaaggtgctatttcagcagttcgagtattcagttgtggacatgcaacacatcttcactgt
gagtctgaacaaagcaaatcatccaataaggattttaaagatggatgtccggtttgtctc
tcaatgagtgacacacaagcccggaacaaatcacctataatagctgagaatgggctaccc
aactatcccgtggttgaacatgaagtaccatatggcgtccatcataatcacgagacagat
catgttgagagatctcgtgggcttcaccagatgtcacggtttgaaatactgaacaatctc
cagaaaggtcagaagtcttttcatattgagactgtacccccgttgaaactttctccgcca
gccatatatcatgaaaagatacaaaagagagtaagtttggtgggagaatccagcagacat
tcagttagaagtgaaaaaacacagaaaatatggcacatgaaggagccaaaatcaaagaaa
tcagggaattggcttccaccaaagtcaagcatattcagttctgacaagaatcaagtgcgg
tag
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integrated database retrieval system
