KEGG   Triticum dicoccoides (wild emmer wheat): 119315251
Entry
119315251         CDS       T07278                                 
Name
(RefSeq) DNA repair protein RAD5A-like
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tdc03400]
    119315251
DNA repair and recombination proteins [BR:tdc03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    119315251
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-C3HC4_4 zf-RING_2 DEAD ResIII RING_XB3-XBAT31 Prok-RING_4 zf-RING_5 zf-ANAPC11 zf-RING_4
Other DBs
NCBI-GeneID: 119315251
NCBI-ProteinID: XP_037445816
LinkDB
Position
6A:94036504..94047258
AA seq 1029 aa
MAKKGERAEQVAAVRAVLGEETPEMDIIRALHMAGDDPTKTINILLDLHHNLPPSPSPSP
SPPPQPPPVQPTKPSSKSIPQPKTPAQPKPAAAAAAAGKPRPKSNPAPTGGGEHWWLVGS
AEMAGLSTCKGRRIAAGEPVTFSFPNSATAAASGKGRPGRFALASCTSEIMRFSTPTHGE
VGRIPNEWARCLLPLLKEGKVKVEALCKSAPEVLSIMDTVLLSASIYINSSMFRDQKQSP
PKATRAATEDSTFHPLPALFKVIGITPFMKAAFTPEDLYSRKRPIERKSSNGEPVAKLTS
EKLKLSSSGNEDDHAEGTVSDSDLDDIIGISDSSALEERDPPEALQCDLRPYQKQALHWM
LQLEKGSCSQDAATTLHPCWEAYKLDDKREFVLYLNVFSGDATTEFPSTLQLSRGGILAD
AMGLGKTIMTISLLLSDSSKGRVTTQHSTQISGEASGLGETPIQSLDSVKNLASPFSFSK
LRKPKAPLIGGGNLVICPMTLLSQWKAEIEAHTKPDSLNIYVHYGQSRPKEASFIGQNDI
VLTTYGVVASEFSTESSTENGGLYSVHWFRIVLDEAHMIKSSKSLISQAAAALTADRRWC
LTGTPIQNNLEDLYSLFRFLKVEPWRNWALWNKLVQKPFEEGDERGLKLVQTILKPVMLR
RTKHSTDKEGRPILTLPPANIEVKYCDLSESEKDFYEALFRRSKVKFDQFVEQGKVLHNY
ASILELLLRLRQCCDHPFLVMSRGDTQEFADLNKLAKRFLHGGNSNVNGDSSSLPSKAYI
EEVVQELQKGEGECPICLEAFEDAVLTPCAHRLCRECILSSWQSPAAGLCPVCRKSMTKQ
DLITAPTNSRFQVDVEKNWVESSKISFLLQELESLRSSGAKSIVFSQWTAFLDLLEIPLS
RHGISFTRLDGTLNLQQREKVIREFSEDKRILVLLMSLKAGGVGINLTAASNAFVMDPWW
NPAVEEQAVMRIHRIGQMKSVSIKRFIVKGTVEERMEAVQARKQRMISGALTDQEFRTAR
LEELKMLFS
NT seq 3090 nt   +upstreamnt  +downstreamnt
atggcgaagaagggcgagagggcggagcaagtggcggcggtgcgcgcggtgctcggcgag
gagacgccggagatggacatcatccgcgcgctccacatggccggcgacgaccccaccaag
accatcaacatcctcctcgacctccaccacaacctgccgccgtcgccgtcgccgtcgccg
tcgcccccgccccagcccccgccggtccaacccaccaaaccctccagcaaatcgatcccg
cagcccaaaacccccgcgcaaccgaagccggcggcggcggcggcggcggccgggaaacct
aggcccaagtccaaccccgcgcccaccggcggcggcgagcactggtggctggtggggagc
gccgagatggccggcctgtccacctgcaagggcaggcgcatcgccgccggggaaccggtc
accttctcgttccccaactccgcgaccgcggccgcctcgggcaagggccgtcctggtcgc
tttgccctcgcttcctgcacctcggagatcatgcgcttctcaaccccgacccacggggag
gtcggccgcatccccaacgagtgggcgcggtgtctgctgccccttctcaaggaggggaag
gtcaaagtcgaggccctgtgcaaatccgctcctgaggttcttagcatcatggacaccgtt
ctcttgtctgctagtatatacatcaacagctccatgttccgtgaccaaaagcagtcaccg
cccaaggcaacgcgtgctgctacggaggactccacattccatccactccccgcacttttc
aaagtcatcgggattaccccttttatgaaggcagcatttactccagaagatctctattcc
agaaagcgaccaattgaaagaaagagcagtaacggagagccagtcgcaaagttgacatct
gagaaattgaaattatcttctagcggaaatgaagatgatcatgctgaaggaactgtttca
gattcggatttggatgatataattggaatctcagacagttctgcattggaggagagggat
ccacctgaggctctgcagtgtgatctgcgcccttatcagaagcaggcccttcattggatg
ctgcagcttgagaaaggcagttgctcccaggatgcagctacaacccttcacccttgttgg
gaggcatataagcttgatgacaagagggaatttgttctgtacttgaatgtattttccggg
gatgccaccactgaatttcctagtacattacagctttctagaggagggattctggcagat
gcaatgggactagggaagactatcatgacgataagtcttcttctttctgattctagcaaa
gggcgcgtcacaactcagcatagtactcagatctctggagaagctagtgggctgggtgaa
actcctattcagtcccttgattccgtgaagaatctagctagccctttttcttttagcaag
ctcaggaaacctaaggccccactgattggaggtggaaatctagttatctgcccgatgaca
ctactgagtcagtggaaggcagagattgaagctcatacaaaaccggattctttgaatata
tatgttcattatggccaaagcagaccaaaggaagcaagctttattggtcagaatgatatt
gtcctgaccacctatggagtcgtggcatcagaattttcaaccgagagttctacagaaaat
ggtggcctctactctgttcactggtttagaattgtgcttgatgaggcgcacatgataaag
tcatctaaaagtttaatatcccaagctgctgctgctcttactgctgatcggcgctggtgt
cttactggtacaccaattcagaacaacttggaggatctatacagcctttttaggtttctg
aaggttgaaccatggagaaactgggccctgtggaataaacttgtacaaaaaccatttgaa
gaaggtgacgaaagaggcttaaagctagtgcagaccattttaaagccagtaatgttgagg
agaactaaacatagcacagacaaggagggcagaccaatccttactctacccccggcgaat
attgaagtgaaatattgtgatctatcagagtctgagaaggacttctatgaagctctgttt
cgacgatctaaggtgaaatttgatcagtttgtggagcaagggaaggtcctgcacaattat
gcttcaattctggagttgcttttgcgccttaggcaatgttgtgaccatccatttcttgtt
atgagtcgtggagatacacaggagtttgcagacctcaataagcttgcaaagcgtttcctg
catggtggtaatagtaatgttaatggggattcttcttcccttccctctaaggcttacatt
gaagaggttgtccaagaactgcagaaaggtgagggggaatgccctatttgcctggaagcc
tttgaggatgctgtattaactccctgtgctcatcgattatgccgagagtgtattttatct
agttggcagagtccagcagcaggtctttgtcctgtttgtagaaagtcgatgaccaagcaa
gatcttattactgctccaactaacagtcgcttccaagttgatgttgagaagaactgggtt
gaatcttcgaagatatcttttcttctacaggaattagaatctcttcgcagttcaggcgcc
aagagtatcgtgtttagtcagtggactgcatttctagatctcctggaaattccactttcc
aggcatggcatttcatttaccagactggatgggaccttaaatcttcagcagagagagaaa
gtaatccgtgagttttctgaggacaaacgaattctggttttacttatgtctctgaaggct
ggtggtgttggaataaacctcacagctgcctctaacgcgtttgtcatggacccttggtgg
aatcctgctgttgaagaacaagctgtcatgcgcatccatcgaattggtcaaatgaagagt
gtttctatcaaaagattcattgtcaagggtactgttgaggaaagaatggaagctgtgcag
gctcgtaagcagcgaatgatttccggagcgttgacggaccaggaattccgcacagcacgt
ctagaagaactgaagatgctcttctcttga

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