Triticum dicoccoides (wild emmer wheat): 119315682
Help
Entry
119315682 CDS
T07278
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
119315682
Enzymes [BR:
tdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
119315682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
RhgB_N
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
119315682
NCBI-ProteinID:
XP_037446107
LinkDB
All DBs
Position
6A:complement(82279742..82282387)
Genome browser
AA seq
668 aa
AA seq
DB search
MATTARLILLAVAVSLMLQLATVSAAPSSGSRGGVTLRVDGRQVVVDNGLVQVTLSRPGG
HITGVRYGGDRTNLLHSTRSRNTGGYWDMVWNIPGSDQRGLLNSLDGSEFRVVTQSDDQV
ELSFRSTYSPGRRSGVRLNFDKRLVMLKGSSGFYSYAILEHGADTPAIDISLARLAFKLN
TERFNYMAVSDDVQRYMPRAADRESPRSSPLAYKEAVLLVDPSEPQFKGEVDDKYQYTLD
TKDNKVHGWVSTSSGQPSHVGFWVVTPSSEFKSGGPLKRDLTSHVGPTCMSVFHGTHYVG
DDIVARIGDGEQWKKVMGPVFVYLNSNSEKVDPRALWEDAKATAQAEAKKWPYSFPESPD
FHKAGERGSVTGRLLVRDKYVSRDNMPARAAYVGLAAPGQPGSWATQSKGYQFWTTASNT
SGEFTIDNVRAGEYNLYAWVPGVLGDYLNTTRVTVTPGGAINLGDLLYEAPRSGPTLWEI
GVPDRSAAEMFVPDPEAKYLNKLFQNKDRYRQYGLWERYAQLYPTDDLVYTVGESHHSKD
WYFAHVTRKVGDDIVPTTRQVRFHLGRVVPGGTYTLRVALAAAHAARLQVQVNGATRRVG
VFGTPAFGDGNAIARHGDHGTQWSFEFPISGRLLQEGDNTIHLTQTRANSIFLGVMYDYI
RFEGPPGS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgacggcgcgcttgatcctgctcgccgtcgccgtgtcgttgatgctgcagctc
gccaccgtgtcggcggcgccatcgtcgggatcccgcggcggcgttacgctgcgcgtggat
ggtagacaggtggtggtggacaacggcctggtgcaggtgacgctgtcgaggcccgggggc
cacatcaccggcgtccgctacggcggggatcggacgaacctcctgcactccaccagaagc
agaaacactggcgggtactgggatatggtgtggaacatccccggctccgaccaacgaggc
ctgctcaactcgctggatggttcggagttcagggtggtaacgcagagcgacgaccaggtg
gagctgtcgttccggagcacgtacagcccgggacgtcggagcggcgtccggctcaacttc
gacaagaggctggtgatgctcaagggcagctccgggttctacagctacgccatcctggag
cacggcgccgacacgccggccatcgacatcagcctggcgcggctcgccttcaagctcaac
acggagagattcaactacatggccgtctcggacgacgtacagcggtacatgccgcgggcg
gccgaccgggagtcgccccgtagctccccgctggcgtacaaggaggcggtgctgctggtc
gacccgtcggagccgcagttcaagggggaggtggacgacaagtaccagtacacgctggac
accaaggacaacaaggtgcacgggtgggtcagcactagcagcggccagccgagccacgtc
gggttctgggtcgtcacccccagcagcgagttcaagagcggcgggccgctcaagcgcgac
ctcacctcgcacgtcggaccgacctgcatgagcgtgttccatgggacgcactacgtcggg
gacgacatcgtggcgcgcatcggggacggcgagcagtggaagaaggtcatgggccccgtg
ttcgtctacctcaactcaaactcggagaaggtagacccgcgggcgctctgggaggacgcc
aaggcgacggcccaggctgaggcgaagaagtggccctacagcttcccggagtcgccggac
ttccacaaggccggcgagagaggctccgtcaccggccgattgctcgtaagggacaagtac
gtgagcagggataacatgcctgctcgggcagcttacgtaggcctggccgcgcccgggcag
cctggctcatgggcgacgcagagcaagggctaccagttctggacgacggcgtcgaacact
tccggcgagttcaccattgacaacgtccgggcgggggagtacaacctctacgcgtgggtt
cctggggttctcggcgattacttgaacaccacccgcgtcaccgtaacacccggcggtgca
atcaacctcggcgatcttttgtacgaggctccgagatcagggccgacactgtgggagatc
ggcgttcctgaccggagcgcggcggagatgtttgtccctgaccccgaggcgaagtacctc
aacaagctcttccagaacaaagacaggtacaggcagtacgggctgtgggaaaggtacgcc
caactgtacccgacggacgatctcgtctacaccgtcggcgaaagccaccactccaaggac
tggtacttcgcacatgtcacaagaaaggtcggcgacgacatcgtgccgacgacgcggcag
gtccggttccacctgggccgcgtcgtgcctggcggcacctacaccttgcgcgtggccctc
gcggccgctcacgcggcgaggctgcaggtccaggtgaacggggcgacgaggcgtgtgggg
gtcttcgggacgccggcgttcggcgacggcaatgcgatcgcgaggcacggcgaccacggc
acgcagtggagcttcgagttccctatcagcgggagactgctccaggaaggcgacaacacc
atccacctcacgcagacgagggccaacagcatattcctaggggtcatgtacgactacata
cggttcgaaggacctcctggttcatag
DBGET
integrated database retrieval system