Triticum dicoccoides (wild emmer wheat): 119315683
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Entry
119315683 CDS
T07278
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
119315683
Enzymes [BR:
tdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
119315683
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
RhgB_N
Motif
Other DBs
NCBI-GeneID:
119315683
NCBI-ProteinID:
XP_037446108
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Position
6A:82415236..82417931
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AA seq
670 aa
AA seq
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MATTARLILLAVAVSLMLQLASVSAAPPSGSRGGVTLRVDGRQVVVDNGLVQVSLSRPGG
HITGVRYGGEGTNLLHSSRSRNTGGYWDMVWDIPGSDQRDLLNSLDGSEFRVVTQSDDQV
ELSFRSTYSPERRNAVRLNVDKRLVMLKGSSGFYSYAILEHGADTPAIDITQARLAFKLN
TDRFNYMAISDDVQRYMPRAADRDSSRSSPLAYKEAVLLVDPAEPQFKGEVDDKYQYTLD
TKDNRVHGWVSTSNGQPSHVGFWLVTPSSEFKSGGPLKRDLTSHVGPTCISMFHGRHYVG
NDIVARIGDGEQWKKVMGPVFVYLNSNSEKGDPRALWEDAKATAQAEAAKWPYSFPESPD
FHKAGERGSVTGRLLVRDKYVSRENMPARAAYVGLAAPGQPGSWATESKGYQFWTTASNT
SGEFTIGNVRAGEYNLYAWVPGVLGDYMNTTRVTVTPGGAINLGDLVYEAPRSGPTLWEI
GVPDRSAKEMFVPDPDAKYLNKLFQNKDRYRQYGLWERYAQLYPMDDLVYTVGESHHSKD
WYFAHVTRKAGDDIVPTTRQIRFRMGRVVPGGTYTLRVALAAAHAARLQVQVNGGTRRGG
GIFGTPAFGDGNAIARHGDHGTQWSFEFPISGRLLREGDNIIHITQTRANSIFLGVMYDY
IRFEGPPGSS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgacggcgcgcttgatcctgctcgccgtcgccgtgtcgttgatgctgcagctc
gcctccgtgtcggcggcgccaccgtcgggatcccgcggcggcgttacgctgcgcgtggat
ggtagacaggtggtggtggacaacgggttggtgcaggtgtcgctgtcgaggcccgggggc
cacatcaccggcgtccgctacggcggggaagggaccaacctgctgcactccagcaggagc
agaaacactggcgggtactgggatatggtgtgggacatccccggctccgatcaacgagac
ttgctcaattcgctggatggctcggagttcagggtggtaacgcagagcgacgaccaggtg
gagctgtcgttccggagcacgtacagcccggaacgtcggaacgccgtccggctcaacgtc
gacaagaggctggtgatgctcaagggcagctccgggttctacagctacgccatcctggag
cacggcgcggacacgccggccatcgacatcacccaggcccggctcgccttcaagctcaac
acggacaggttcaactacatggccatctcggacgacgtacagcggtacatgccgcgggcg
gccgaccgggactcgtcccgcagctccccgctggcgtacaaggaggccgtgctgctggtc
gacccggcggagccgcagttcaagggggaggtggacgacaagtaccagtacacgctggac
accaaggacaaccgggtgcacgggtgggtcagcactagcaatggccagccgagccacgtc
ggcttctggctcgtcaccccgagcagcgagttcaagagtggcgggccgctcaagcgagac
ctcacctcgcatgtcggcccgacgtgcatcagcatgttccatgggaggcactacgtcggg
aacgacattgtggcgcgcatcggggacggcgagcagtggaagaaggtcatgggccccgtg
ttcgtctacctcaactcaaactcggagaagggagacccgcgggcgctctgggaggacgcc
aaggcgacggcccaggccgaggcggccaagtggccctacagcttcccggagtcgccggac
ttccacaaggccggcgagagaggctccgtcaccggccgattgctcgtaagggacaagtac
gtgagcagggagaatatgcctgctcgggcagcttacgtcggcctggccgcgcccgggcag
cctggctcgtgggcgacggagagcaagggctaccagttctggacaacggcgtcgaacact
tccggcgagttcaccattggcaacgtccgggcaggggagtacaatctctacgcgtgggtt
cccggggttctcggcgattacatgaacaccacccgcgtcaccgtaacacccggtggtgca
atcaacctcggcgatcttgtgtacgaggccccgagatcagggccgacgctgtgggagatc
ggcgtccctgaccggagcgcgaaggagatgttcgtccccgaccccgacgcgaagtacctc
aacaagctcttccagaacaaagacaggtacaggcagtacgggctgtgggagaggtacgcc
caactgtacccgatggacgatctcgtctacaccgtcggcgaaagccatcactccaaggac
tggtacttcgcacatgtcacaagaaaggccggcgacgacatcgtgccgacgacgcggcag
atccggttccgcatgggccgcgtcgtgcccggcggcacctacaccttgcgcgtggccctc
gcggccgctcacgcggcgaggctgcaggtccaggtgaacggggggacgaggcgtggtggc
ggcatcttcggcacgccggcgttcggcgacggcaacgcgatcgcgaggcacggcgaccac
ggcacgcagtggagcttcgagttcccgatcagcgggagactgctccgggaaggcgacaac
atcatccacatcacgcagacgagggcgaacagcatattcttaggggtcatgtacgactac
attcggtttgaaggacctcccggttcttcctag
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