KEGG   Triticum dicoccoides (wild emmer wheat): 119315881
Entry
119315881         CDS       T07278                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119315881
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tdc03019]
    119315881
   03041 Spliceosome [BR:tdc03041]
    119315881
Messenger RNA biogenesis [BR:tdc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     119315881
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     119315881
Spliceosome [BR:tdc03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    119315881
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 119315881
NCBI-ProteinID: XP_037446230
LinkDB
Position
6A:404021137..404026056
AA seq 356 aa
MAAGGVGVRLDQGKRSAAFRKMREQRRVLLIKEAELRRRQWLPSQAEIEAAWGSGGAHVP
SHLSSSCVCWKPGSRGCDKARTRGRTNSATNPQQPAADECKEEEIIEGLPEPFSRDELLD
VLVQVRLRDPTLLSRLATSAASDAAHRRLYIHGLSPSGTSAALAAAFVPFGVLDGCHAVA
DRATGRCRGYGFIILRRCSSRRRALADSSKRVGGRPIACQFASVGPAGPSPGGTGRKLLV
DRVPARTSIDELRRFFSEFGEIEAGSLVADHATGQFCGYATFLYKSPEGIAKGLEEPRKV
FDGCELHCRHAQRQTKRKCATAAPEDTGCQINVTRAAAFQFPFRRRYSQLPPRSHF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atggcggcagggggagttggcgtcagattggaccaggggaagagatccgctgcctttcgg
aagatgagggagcagcggagagtgctgcttataaaggaggcagagctacgaagacgacag
tggttgcctagccaggcagaaatcgaggctgcgtggggaagtggaggcgcccacgtccca
tcacacttgtcctcaagttgtgtttgctggaaaccaggtagcaggggttgtgacaaagct
aggacaaggggaagaacgaactccgcgacgaacccacaacagccggcggccgatgagtgc
aaggaggaggaaatcatcgaggggcttcctgagccgttcagtagggacgagctccttgac
gtcctggtccaggtccgcctccgagatcccaccctgctctcccgcctcgccacctcggcg
gcctccgacgccgcgcatcgccgcctctacatccacggcctcagccccagcggcacctcc
gccgcgctagccgccgccttcgtcccctttggggtcctcgatgggtgccacgccgtcgct
gaccgcgccaccggccgctgccgcggctatggcttcatcatcctccgccgatgctcatcc
cgccgccgcgccctcgcggactcctccaagcgcgtcgggggccgccccattgcctgccag
ttcgcctcggtcggtcccgccggcccttcccccggaggcacgggccgcaagctcttagtg
gacagggtgcccgcccgcacctcgatcgacgagctgaggaggttcttctccgagttcgga
gagatcgaggcaggatccctcgtcgccgaccacgcaaccgggcagttctgtgggtacgca
accttcctctacaagtctcccgaggggatcgccaaggggcttgaggagcccaggaaggtg
ttcgacgggtgcgagctccattgcaggcacgcacagaggcagaccaagaggaagtgtgcc
actgccgcacctgaagacaccggttgccagataaatgtcactcgtgcagcggccttccaa
tttccgttccgaaggagatactctcaacttcctccacgcagtcacttctag

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