Triticum dicoccoides (wild emmer wheat): 119316655
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Entry
119316655 CDS
T07278
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00040
Pentose and glucuronate interconversions
tdc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119316655
Enzymes [BR:
tdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
119316655
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
119316655
NCBI-ProteinID:
XP_037446909
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Position
6A:220754094..220756088
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AA seq
427 aa
AA seq
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MSMDRSLQWSRPASLLLLGAAFLAAAAAVTSANPAYNPDPYSVVDHFNRAVHRSTSPRRA
LSSDKSKKAKYTGPCMATNPIDRCWRCRKDWATDRQRMARCAKGFGRETTGGLKGKIYIV
TDPNDDDFTNPRPGSLRWGVVQTEPLWIIFARDMVINASQEIIIQSDKTIDGRGAQVHVA
NGGGLTVQHQNNVIINNLHVHGIKHTDGGNVSMTATHSTIRTRADGDGVSIFNATKVWVD
HLSMDNCEDGMVDVVAMSTAVTISNTHLAHHNDVMLFGADDKKPEDKVMQVTVAFNHFGR
GLVQRMPRCRYGFFHVVNNDYTNWLMYAIGGSSAPTILSQGNRYRAPPNMAAKEVTKRDY
APESEWKNWVWISDGDLMINDAYFTTSGGQIGQKLNGKDLIKPKPGEYVRRLTRFAGPLD
CNPGSPC
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtccatggatcggagcctccaatggagcaggccggcgtcgctgctcctcttgggggcg
gcgttcctggcggcggcggcggccgtaacgagcgccaacccggcgtacaaccccgacccc
tatagcgtggtcgaccacttcaaccgcgccgtccacaggtcgactagcccgcgtcgtgcg
ctgtcgtcggacaagtcgaagaaggcaaagtacacgggcccgtgcatggcgacgaacccg
atcgaccggtgctggcgctgccgcaaggactgggcgacggaccggcagcggatggcccgc
tgcgccaaggggttcggccgcgagaccaccggcggcctcaagggcaagatctacatcgtg
accgaccccaacgacgatgacttcaccaacccgcggcccgggtcgctccggtggggcgtg
gtccagacggagccgctgtggatcatcttcgccagggacatggtgatcaacgcctcccag
gagatcatcatccagagcgacaagaccatcgacgggcgcggggcgcaggtgcacgtggcc
aacggcggcgggctcaccgtccagcaccagaacaacgtcatcatcaacaacctccacgtg
cacggcatcaagcacacggacggcggcaacgtgtcgatgacggcaacccactccaccatc
cgcacccgcgccgacggcgacggcgtctccatcttcaacgccaccaaagtgtgggtggac
cacctctccatggataattgcgaggacggcatggttgacgtggtggccatgtccacggcc
gtcaccatctccaacacccacctggcccaccacaacgacgtgatgctcttcggcgccgac
gacaagaagccggaggacaaggtgatgcaggtcaccgtcgccttcaaccacttcgggaga
ggcctggtgcagaggatgcctcgctgccgctacggcttcttccacgtcgtcaacaacgac
tacaccaactggctcatgtacgccatcggaggcagcagcgcgcccaccatcctcagccag
gggaaccgctacagagcaccacccaacatggctgccaaggaggtgaccaagcgcgactac
gcgcccgagtccgagtggaagaactgggtgtggatatcggacggcgacctgatgataaac
gacgcctacttcaccacgtccggcggacaaattggccagaagctcaacggtaaggacctc
atcaagcccaagccaggggagtacgtcaggaggctcacccgcttcgccggcccgctggac
tgcaacccgggcagtccctgctga
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