Triticum dicoccoides (wild emmer wheat): 119316720
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Entry
119316720 CDS
T07278
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdc04131
]
119316720
04121 Ubiquitin system [BR:
tdc04121
]
119316720
Enzymes [BR:
tdc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119316720
Membrane trafficking [BR:
tdc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
119316720
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119316720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf-RING_11
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_5
Rad50_zn_hook
zf-RING_16
zf-Nse
zf-RING_Vps41
IBR
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
119316720
NCBI-ProteinID:
XP_037446998
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All DBs
Position
1B:complement(20872131..20874146)
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AA seq
396 aa
AA seq
DB search
MDSSPAASASYWCYSCDRFVRAAASPEGGGDVACPDCGGGFLEEMRRTPPAPAYLRRPRA
HHANDLRLRRSRRAAAAASASGGGGGGDRAPFNPVIVLRRSALGAAAGDDNGDDEGQLAA
ASSFELFYDDGAGSGLRPLPESMSDFLMGSGFERLLGQLAQIEAGGLTRARETPPASKAA
VESMPTVAIAASHVAADCHCAVCKEPFELGAEAREMPCAHIYHEDCILPWLQLRNSCPVC
RHEMPTDSAAAARSQATSAGAEEETTVGLTIWRLPGGGFAVGRFAGGRRPEERELPVVYT
EMDGGFNHGGAPRRISWGSRQSRSTERSAIRRVFRNVFACFGRGHSASSHASSSQMRPEE
MTEASDHSAAFSHGSRSRSMSWRLEDGHAADTMVQR
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggattcgtctccggccgcgtccgcgtcctactggtgctacagctgcgaccgcttcgtg
cgcgccgcggcgtcgccggagggcggcggcgacgtcgcctgcccggactgcggcggcggg
ttcctcgaggagatgcgccggaccccgccggccccggcctacctccgccgcccgcgcgcg
caccacgccaacgacctccgcctccgccgcagccgccgtgccgccgcggccgcctccgcc
tctggaggaggtggcgggggcgaccgcgcgccgttcaacccggtcatcgtgctccggcgc
tcggcgctcggggccgcagcgggggacgacaacggcgacgacgagggccagctggccgcg
gccagcagcttcgagctcttctacgacgacggggcgggctcgggcctgcgcccgctgccg
gagagcatgtcggacttcctcatggggtccggcttcgagcggctcctcggccagctcgcg
cagatcgaggccggcgggctcacccgggcccgcgagaccccgccggcgtccaaggcggcc
gtcgagtccatgcccaccgtcgccatcgcggcctctcacgtcgccgccgactgccactgc
gccgtctgcaaggagcccttcgagctgggcgccgaggccagggagatgccctgcgcccac
atctaccacgaggactgcatcctcccctggctgcagctccgcaactcgtgccccgtgtgc
cgccacgagatgcccaccgacagtgccgccgccgcgcggtcgcaggccaccagcgccggg
gccgaggaggagaccaccgttggcctcaccatctggaggctgccgggaggcgggttcgcc
gttgggaggttcgccggcgggaggaggcccgaggagagggagctcccggtcgtctacacg
gagatggacggcggtttcaaccacggcggcgcgccgaggaggatctcgtgggggtcgagg
cagagccggtcgacggagaggagcgccattcgacgcgtcttccgcaatgtgtttgcctgc
ttcggccgcggccattcggcgagctcccacgcttcgtcctcgcaaatgaggcccgaggag
atgaccgaggcgtcggatcactccgcggcgttcagccacggctcgagaagccggagcatg
agctggaggctcgaagacggccacgccgccgacacgatggtgcagagatag
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