Triticum dicoccoides (wild emmer wheat): 119316998
Help
Entry
119316998 CDS
T07278
Name
(RefSeq) ribosomal RNA small subunit methyltransferase nep-1-like
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119316998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tdc03009
]
119316998
Enzymes [BR:
tdc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
119316998
Ribosome biogenesis [BR:
tdc03009
]
Eukaryotic type
90S particles
Other 90S particles
119316998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
119316998
NCBI-ProteinID:
XP_037447279
LinkDB
All DBs
Position
6A:complement(395668410..395672195)
Genome browser
AA seq
280 aa
AA seq
DB search
MGRPYAVKGKKKRKLEGGEASRAPPVDAEAVEQEVKENEEVMEGEAAAEEAFAEEVGEGI
PIVPRPVDSKRRPGAIFVLERACLEVGKVGKGMQILNSDDHANYLRKQNRNPADYRPDII
HQALLAIFDSPLTKAGRLQAVYVRTEKGVLFEIKPHVRMPRTFKRFCGLMSQLLQKLSIT
AVGKREKLLNVIKNPVTQYLPVGVRKIGLSYSAEKAVNLFDYVAKSNDDEPLVFVVGAMA
HGKVDKEYSDDYIQISGYPLSAACCLNRICSALEQKWNIQ
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggggcggccgtacgcagtgaaggggaagaagaagcggaagctggaaggcggcgaagcc
tcgcgcgcccctccggtcgacgccgaggcggtggagcaagaggtgaaggaaaatgaggag
gtgatggagggggaggcggcggcagaggaagcttttgccgaggaggtgggggaggggatc
cccatcgtgccccgcccggtcgacagtaagcggcggccgggcgctatcttcgtacttgag
agggcctgcctcgaggtcggcaaagtcggcaagggtatgcaaatcttgaattcggatgat
cacgcaaactatttaaggaagcagaatcgcaatccagctgattacaggcctgatatcatt
caccaggcactactagcaatatttgatagccctctaactaaggctgggaggttacaagct
gtttatgttaggactgaaaagggagtgttgtttgaaatcaagcctcatgttcgcatgcca
cggacattcaaacgtttctgtggcttgatgtcacagttattgcaaaagctgagcatcacg
gcagttgggaagcgcgagaagctccttaatgttattaaaaatcctgttacccagtatcta
cctgttggcgtacggaaaattggcctttcatatagtgcggagaaggcagttaatttgttt
gactatgttgctaagtccaatgatgatgaacctcttgtgtttgtggttggtgccatggcc
catggaaaggttgacaaggaatactcagatgattacatacagattagcggttaccctctc
agtgctgcctgctgcctgaatcgaatatgcagtgccttggagcagaaatggaacatccag
tga
DBGET
integrated database retrieval system
