Triticum dicoccoides (wild emmer wheat): 119317444
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Entry
119317444 CDS
T07278
Name
(RefSeq) protein TRANSPARENT TESTA GLABRA 1-like
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119317444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119317444
03036 Chromosome and associated proteins [BR:
tdc03036
]
119317444
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
119317444
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
119317444
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_1st
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_RIG_2nd
WDR55
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
EIF3I
MIOS_WD40
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
119317444
NCBI-ProteinID:
XP_037447801
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All DBs
Position
6A:complement(494373396..494379003)
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AA seq
358 aa
AA seq
DB search
MDQPKPTPSAAASPAGADAAPNPYAFTCELPQSIYALAFSPSAPVLAAGSFLEDLHNRVS
LLCFDSVHPTAASFRAVPSLSFDHPYPPTKLQFNPRAASTPLLASSSDALRLWHAPLDDL
SASXXXXXXELRSVLDNRKASASEFCAPLTSFDWNEIEPRRIGTASIDTTCTVWDIERGV
VETQLIAHDKAVHDIAWGEAGVFASVSADGSVRVFDLRDKEHSTIVYESPRPDTPLLRLA
WNRYDLRYMAALLMDSNAVVVLDIRAPGVPVAELHRHGGCVNAVAWAPQAARHLCSAGDD
GQALIWELPEAPAAVPPEGIDPVLVYDAGAEINQLQWVAGHPDWMGISIENKVQLLRV
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggaccagcccaagccgacgccgtcggcggccgcctcgccggcgggggcggacgcggcg
cccaacccctacgccttcacgtgcgagctcccccagtcgatctacgcgctggccttctcc
ccctccgcgcccgtcctcgccgccggcagcttcctcgaggacctccacaaccgcgtctcc
ctcctctgcttcgactccgtccaccccaccgccgcctccttccgcgccgtgccctccctc
tccttcgaccacccctacccgcccaccaagctccagttcaacccgcgcgccgcctccacg
cccctcctcgcctcctcctccgacgccctccgcctctggcacgcccccctcgacgacctc
tccgcctcnnnnnnnnnnnnnnnnnnngagctccgctccgtcctcgacaaccgcaaggcc
tccgcctccgaattctgcgcgcccctcacctccttcgactggaacgagatcgagccccgc
cgcatcggcaccgcctccatcgacaccacctgcaccgtctgggacatcgagcgcggcgtc
gtcgagacgcagctcatcgcgcacgacaaggccgtgcacgacatcgcatggggggaggcc
ggcgtcttcgcctccgtctccgccgatggctccgtccgcgtctttgatctccgggacaag
gagcactccaccatcgtctacgagagcccccgcccggacacgccgctcctcaggcttgcc
tggaaccgctatgacctgcgatacatggccgccctgctcatggacagcaacgccgtcgtt
gtgctcgacatacgcgcacccggggtgcctgtggccgagctacatcggcatgggggatgc
gtcaacgctgttgcgtgggcaccgcaggctgcaagacacctctgctccgcaggggacgac
gggcaggcgctcatctgggagctgcctgaggcaccggcagcagtgcctcccgaagggatt
gatccagttcttgtttatgatgcgggtgccgagataaaccagctgcagtgggtggccgga
cacccggactggatgggcatttccattgagaacaaggtccagcttctccgggtctga
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integrated database retrieval system
