Triticum dicoccoides (wild emmer wheat): 119317712
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Entry
119317712 CDS
T07278
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase nop2-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tdc03009
]
119317712
Enzymes [BR:
tdc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
119317712
Ribosome biogenesis [BR:
tdc03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
119317712
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-GeneID:
119317712
NCBI-ProteinID:
XP_037448104
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All DBs
Position
6A:532067017..532072567
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AA seq
773 aa
AA seq
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MARKVAQRRPAAPPAPPAAKKVVKVPSRAAKSAAPKKQKLPEPSSDDDSEAEQQPLHEEE
EEDSDVDAPSDSDADELSGSDAGSSEEEEDDEEEEEDDNDDEEEEDDDPLAGDFLAGSDD
DSDEGGDSGEESDGSDDLEAKSAALDRQKEQIEEDAAADLALNIRSESDEFRLPTKEELE
EEALGPPNLPNLKRRISEIVRVLSNFSKLRQENVARKDYVDQFKTDVMAYYGYNEFLIEA
FVEMFPAVEVVELLESFEKRPPECLRTNTLKTRRRDLAAALIPRGFNLDPIGKWSKVGLV
VYDSTVSSGATVEYMAGHYMKQGASSFLPVMALAPQEKERIVDMAAAPGGKTTYIGALMK
NTGIIYANELNEKRLHGLLGNIHRLGVTNTIVCNYDGKELPKVLGMNSVDRVLLDAPCTG
TGTVWKDAQIKTSKDIDDIRNCAFVQKQLLLAAIDLVDANSKTGGYIVYSTCSMMIPENE
AVIDYALKKRDVKVVPCGLDFGRPGFIRFREHRFHTSLDKTRRFYPHVNNMDGFFVAKLK
KMSNTIPASSESSKEPEEAAEGVVDPNQDEEDEKDVPDGQSTKSKNHKQGKKKNEQASIP
EGEGDQSQAPERPAKHPKSNKGVKKSSGPKSAEMNGDKKGTRDEQTEHVKSQKGSKKSKG
PKNAGMDVDEKETPSEQTEEVKSHKGAKRSSGPKSAGINGEKKDVPEEQTEQTSHKKKHV
SDKIKKSGSKSTSGTKEKKPVSNEGSKKRKRKWQFKLRRDWEAKQKWEKRTKV
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggcccggaaggtcgcgcagcgcaggccggcggcgcctcccgcaccgcccgcggccaag
aaggtggtcaaggttccctcgagggcggccaagagcgcggcgccgaagaagcagaagctt
cccgagccctcctccgacgacgactccgaggcggagcagcagccgctccacgaggaggag
gaggaggattcagacgtcgacgccccctccgactccgacgccgatgagctctctggctcg
gacgccggtagcagcgaggaagaggaggacgacgaggaggaggaggaggacgacaacgac
gacgaagaagaagaggacgacgaccccctcgccggcgacttccttgccggcagtgacgac
gacagtgacgaggggggcgactctggagaggaatcagatgggtctgatgacctcgaggca
aagtcagcagctcttgatcgacagaaggagcagattgaagaagatgcagctgcggacctt
gcactcaacataagatcagaatctgatgaattccggttgcccaccaaggaggagttggaa
gaagaggcacttggaccacctaaccttccaaatcttaaaaggaggatctcggaaattgta
cgggtactctcaaactttagcaagctgaggcaagaaaatgttgccagaaaagattatgtt
gatcagttcaagacggacgtgatggcgtactatggatacaatgaatttctcattgaagca
tttgttgagatgttcccagctgttgaggttgttgagctacttgaatcatttgaaaaaaga
ccccctgagtgcttgcgtacaaatacactaaagacccgtaggagggatcttgctgctgct
cttattcctagagggtttaatctggatccgattggaaaatggtcaaaggtaggattagtt
gtgtacgactccactgtttcgtctggcgccactgttgaatatatggcaggacattacatg
aaacaaggcgcgagttcctttttgccagtgatggctcttgctccacaggagaaggagcga
atagttgatatggcagctgccccaggtggcaagaccacatacattggagctctgatgaaa
aatactggaataatctatgcaaatgagcttaacgagaaaaggttgcatggactgttgggc
aacatacatcgcctgggtgtgacaaataccatagtttgtaattatgacggtaaagagctc
cccaaagtacttggaatgaactcagttgacagagtactgttggatgcgccctgcacaggc
accggaaccgtttggaaggatgcacaaataaaaacatctaaggacatcgatgacatcagg
aattgtgctttcgtacaaaagcaattgcttctggctgctattgatttggttgacgccaac
tccaaaactggtggttacattgtttactctacttgttcgatgatgattccagaaaatgaa
gcagtcatcgactatgcccttaaaaagagagatgtaaaggttgttccttgtggattagat
tttggacgcccaggattcatccggttccgggagcatcgcttccatacgtctttagacaaa
acaaggaggttttatcctcatgtcaacaacatggatggctttttcgtagccaagctgaag
aagatgagcaacacaattccagcctcgtccgagtcatctaaagagcccgaagaagcagcg
gagggcgttgttgacccaaaccaggatgaggaagatgagaaagatgttcctgatgggcaa
tccaccaagtcgaagaatcataaacagggaaagaagaaaaatgaacaagcaagtatccct
gaaggggagggggaccagagccaggcacctgaaagaccagcaaagcaccccaagagcaac
aaaggagtgaagaaaagtagtggccctaaaagtgctgaaatgaacggagataagaaagga
acacgcgatgaacaaacagagcatgtcaagagtcagaagggttccaagaaaagtaaaggc
cctaaaaatgctggaatggatgtagatgagaaagaaacacccagtgagcaaacagaggag
gtcaagagccacaagggtgcgaagagaagtagtggacctaaaagtgctggaataaatgga
gagaagaaagatgtgcccgaggaacaaacagagcagaccagccacaaaaagaagcatgtg
tctgataaaattaagaagtctggttccaagagcacctcagggaccaaagagaagaaaccg
gtgtccaatgaaggaagcaagaagaggaaaaggaaatggcaattcaagctgaggcgggac
tgggaggcaaaacagaagtgggagaagaggacgaaggtataa
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