Triticum dicoccoides (wild emmer wheat): 119317804
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Entry
119317804 CDS
T07278
Name
(RefSeq) ATP-dependent RNA helicase DEAH13-like isoform X1
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tdc03009
]
119317804
Enzymes [BR:
tdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119317804
Ribosome biogenesis [BR:
tdc03009
]
Eukaryotic type
90S particles
Helicases
119317804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DHX37_C
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
ATPase
nSTAND3
PhoH
AAA_19
ResIII
Motif
Other DBs
NCBI-GeneID:
119317804
NCBI-ProteinID:
XP_037448196
LinkDB
All DBs
Position
6A:543807026..543816831
Genome browser
AA seq
1326 aa
AA seq
DB search
MDEEDSNAPILPCKRKNKPQGKGKDGKKNKTKEDAKMSKKTQLKKPQKLEVGTPSVDSNV
LILPCKRKDKSQGKGKDGKKNKTKEDAKMSKTQLKKLQKLEEDKQKKALQAQSIETLQKH
RIADEAYSLLHTSGSIGQAATMKEKRRRAMQLSKAGLDVPEELSLFKKNSDQTGVPVPEN
TEAAPEASPVKLVQAAKLYHPGSERKNHESDAVKPNNGVGVSIVNQKTEETNDDADILAH
QSIPKQQTEKTNDDDDILVHPTVHSSVPSCSGVEIDMQDKEPQQGEAAVQECFNSPIVVH
VSRPHEVEKARRDLPIIMMEQEIMEAIYENSVVILCGETGCGKTTQVPQFLYEAGFGTSN
RADRKGMIGITQPRRVAVLATSKRVSYELGLKLGKEVGFQVRHDKKVGNNCSIKFMTDGI
LLREVQSDFLLKHYSVIILDEAHERSLNTDILIGMLSRVIKARKFVYADQQKQIRSGMKI
DPADMVSQLKVVLMSATLQLKDFISNRRLFDVIPPAVEVPTRQFPVTVHFAKRTHDDYLA
QAYKKVLSIHKSLPPGGILVFVTGQREVDYLCKKLQRASKRQIGKKPEMVGDENGSRPEI
EEKEIFEAYDIDRTEPEHQDDIFSSYGEDETDDELNVASSDAETESEMETDSDEEDSVAH
ETAEEDGPVLSFLKGAESSSVLNASFKAISGQPETAEEASNATIAEKSGPSASRARLRVL
PLYAMLPASQQLRVFHDIPEGERLVVVATNVAETSLTIPGITYVVDTGKEKVKNYDHATG
MASYEVQWISKASASQRAGRAGRTGPGHCYRLYSGAAYSKDDLFPEFTEPEIKKMPVEGI
VLMLKSMNIDKVENFPFPTPPNKESLVEAQRCLKILEAVDNQEKLTSMGKAMAQYPMSPR
HSRLLLTIIKMLKSQEGCARSNLILGYATAAASALSYTNPFQVQGNTDRETNEDGPDPEH
KDRHERKSQKKLKAMVREARKDFSIPSSDALTISHALRSFECSKSRVEFCRDYSLHLKTM
EEMSKLRKQLLRLIFNYSKFCDEFAWNFGGSQDVEQAWGSETNKKPMLNEEEILGQGICA
GWADRVAKKINTFSGLSKEDRKVRAARYQSCALNDMIYLNRSSSVAQIPPDYVVYSELLN
TKRSYMYGVTSVKPGWLLKYASSLCTFSAPLEDPKPYYEPQNDQVYCYVSPIFSRHNWQL
PLHSLPIKEATRRVQIFAWALLKGDVLPCLRVVQKFLALSPSVVLGPASQRRVGDLLSRM
SKKTIYSRAALRDAWNTDPDYLYPEIQAWIQDKYQSQLGAIWEQMHQEVRLEGRELFPKR
FKKVKG
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaggatagcaacgcgccgatcttgccctgcaagaggaagaacaaaccgcaa
gggaaaggcaaagatggcaagaagaacaagaccaaggaagatgctaagatgagcaagaag
actcagcttaaaaagccgcagaaattggaggttgggactccttctgttgatagcaacgtg
ctgattttgccctgcaagaggaaggacaaatcgcaagggaaaggcaaggatggcaagaag
aacaagaccaaggaagatgctaagatgagcaagactcagctgaaaaagctgcagaaattg
gaggaggacaaacaaaagaaggcgctgcaagctcaaagcatcgagactttgcagaagcac
aggatcgctgatgaggcatactcgctgctgcacacttcagggtctattggtcaagctgcg
actatgaaagaaaaacgtaggcgtgccatgcaattatccaaggctggtttagatgtccct
gaagaactttcgctattcaagaaaaactctgatcagacaggagttccagttcctgaaaac
actgaagctgcgccggaagctagcccggtgaagttagttcaggccgcgaaactctatcat
cctggtagtgaacgtaagaatcatgagagtgacgcagtgaagcctaacaatggtgttggt
gtgagcattgtgaatcagaaaactgaagagactaatgatgatgctgacattttggcacat
cagagcattccgaaacaacaaactgaaaagactaatgatgatgatgacattttggtacat
ccgacagttcattcatctgtgccaagttgctctggtgtagagattgatatgcaggataaa
gagccacaacaaggtgaagccgctgtacaggagtgcttcaattctcccattgttgtgcat
gtgtcaagaccacatgaggttgagaaggcgaggagggatctcccaataataatgatggag
caggaaataatggaagctatctatgaaaattcagtggtaattctgtgcggagaaacgggc
tgtggtaaaactactcaggtccctcagttcttatatgaagccggctttggcacaagcaat
cgagctgatagaaaagggatgattggtatcacccagccacggcgtgttgctgttcttgcc
acatccaagagggtatcttatgagttaggacttaagctaggaaaggaggttggttttcaa
gttagacatgacaaaaaggtgggaaataattgctccatcaagttcatgacagatggcatt
ttgctacgagaggtccagagtgactttctgttgaagcactattcggtgatcatcttggac
gaggcacatgaaaggagtttgaacacagatatacttattgggatgctttctagagttata
aaggcacgcaagtttgtgtacgcagaccaacagaaacaaatacgctctgggatgaagatt
gacccggcagatatggttagtcagttgaaagtggtcctgatgagtgctaccttgcaatta
aaagactttatttcaaacagaagattgtttgatgtgattccaccagctgtagaggtgcct
acacgacaatttccagtaacagttcacttcgcaaagaggacacatgacgattatttagcg
caggcttataagaaagttctgtcgatccacaagagtctaccaccaggtggaatccttgta
tttgttactggacaacgagaagtggattatttatgtaagaaattgcaaagagcatccaag
cggcaaattggtaagaagcctgaaatggttggagatgagaatggttcaagaccagaaata
gaagagaaggaaatttttgaagcatatgatattgatagaactgaacctgagcaccaagac
gacatattttcctcatatggtgaagatgaaacggatgatgagctaaatgtcgcttcttct
gatgctgaaacagagagtgagatggaaactgacagtgatgaggaggattctgttgcacat
gaaaccgcagaagaagatgggccagtgttatcatttttaaaaggtgctgagagttcatct
gtactgaatgcatcctttaaagctatatcaggacaaccagaaactgctgaggaagcgagc
aatgctacaattgcagaaaagtcaggtccttctgcttcgcgtgctaggctccgtgtttta
ccactttatgcaatgctaccagcttcgcagcagcttagagtattccacgatattcctgaa
ggggaaagattagttgttgtggcaactaatgttgcagaaacatctttaacaattcctggc
ataacatatgtggtcgatactggaaaagaaaaggttaagaactatgaccatgctactggg
atggcaagttatgaagtacagtggataagcaaggcatcagcatcccaacgtgctgggaga
gctggaagaactgggcctgggcactgttaccgtctttactcaggtgcagcatacagtaaa
gatgacttatttcctgaattcactgagccggagatcaagaaaatgccagttgaaggcatt
gtgcttatgctcaagtctatgaatattgataaggttgaaaactttcctttccctacgcct
cctaacaaggaaagtttggttgaagctcagcgttgcttgaagatattggaagcagttgac
aaccaagaaaaacttacatcaatgggaaaggctatggcgcaatacccaatgagcccacga
cattctcgtcttcttttgacaataattaaaatgttgaagagtcaggaaggatgtgctaga
tctaacctcatattgggatatgcaactgctgctgcatcagctttaagttataccaatcct
tttcaagttcagggcaacactgatagagaaacaaatgaagatggccctgatccagaacat
aaggatcgacatgaaaggaagagccagaagaagctcaaagccatggttcgagaagcacgg
aaagatttttccatccctagcagtgatgctttaaccatttcccatgctttacggtcattt
gagtgttctaaaagccgagttgagttctgcagagactactcgcttcacctgaaaacaatg
gaagagatgtcaaaattgagaaagcagcttcttcgattaatatttaactatagcaaattt
tgtgatgaatttgcttggaattttggaggctctcaagatgttgaacaggcctgggggagt
gaaaccaacaaaaagccaatgctgaatgaagaggaaattctggggcaaggaatatgtgct
gggtgggctgatagggttgcaaagaagataaacactttctctggattgtcaaaagaggat
cgaaaggttcgagctgcacgttatcaatcttgcgctctcaatgatatgatatatctaaac
cgatcatcttctgttgcccaaattccaccagactatgtagtttactccgaactactaaat
acaaagagatcatacatgtatggtgtgaccagtgtaaagccaggatggcttttgaaatat
gctagttctctctgcaccttctcagcaccgctggaggatccaaagccctactatgagcct
cagaatgaccaggtctactgctatgtcagtcccatcttttctcgacataattggcagctt
ccactgcacagtttacccatcaaagaagccacccgtcgggtgcagatatttgcatgggca
ttgcttaaaggggatgtcttgccatgtctaagggtggttcaaaagttcctggctctgtca
ccatctgttgtcctggggcctgccagccaaagaagagttggagatcttcttagcaggatg
agtaaaaagacaatatatagccgggcagcattaagagatgcatggaatactgacccagat
tatctttatcccgagattcaggcgtggatccaggataaatatcagagccagcttggagca
atatgggaacaaatgcaccaagaagttcgccttgaggggcgcgaacttttcccgaagagg
ttcaagaaagttaaagggtaa
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