Triticum dicoccoides (wild emmer wheat): 119317833
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Entry
119317833 CDS
T07278
Name
(RefSeq) tRNA (carboxymethyluridine(34)-5-O)-methyltransferase-like
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tdc03016
]
119317833
Enzymes [BR:
tdc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
119317833
Transfer RNA biogenesis [BR:
tdc03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
119317833
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_25
Methyltransf_12
Methyltransf_23
Methyltransf_31
MetW
Methyltransf_8
Ubie_methyltran
ALIX_LYPXL_bnd
CMAS
Methyltransf_9
Motif
Other DBs
NCBI-GeneID:
119317833
NCBI-ProteinID:
XP_037448229
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Position
6A:547292270..547295702
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AA seq
379 aa
AA seq
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MIQIFSRIAARSPRRATSASRPSSSKHHPGQFSRCSPAYRGITTISTSNPMRSGDGNSEG
QDAPLAEGKDRGCSPGVQSTPDIEKKYVHRVYDAIAPHFSSTRFAKWPKVAGFLNSLRPG
SVVLDAGCGNGKYLGFNPECFYIGCDISPPLIEICAGRGHEVFVADVVNLPYRESVADAA
ISIAVLHHLSTEDRRRKAIEELIRVVKRGGLVLITVWAVEQEDKLLLNKWTPLCDKYNEE
WVDPSSPMVRNKSATTLDSIEETDEDMRAIKQTDDQLKNSFDGLEDKTLIMDEHDKTQQE
YFVPWHLPFHRAEIGGASAVALQNGLAKKDDKKGTVVYNRYYHIFVEGELQRLVAGMKNA
AITDQFYDKSNWCIVLEKL
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgatccagatattttcgaggatagcagcaagaagccctcgccgcgccacctccgcatcg
cgtccgagtagctcgaagcatcatccggggcaattctctcgttgtagcccagcttaccga
ggtattactaccattagcaccagcaatccaatgaggtctggtgatggaaattcggaaggc
caggacgcacccctcgccgaggggaaggaccgcggctgctccccaggtgtccagtccacc
ccggacatcgagaagaagtacgtgcaccgcgtctacgacgccatagcccctcacttcagc
tccacgcggttcgccaagtggcccaaggtcgcggggttcctgaactcgctgaggccaggg
tctgtcgtgctggatgccggctgcggcaacggcaagtacctgggcttcaatcccgaatgc
ttctacataggctgcgatataagcccgccgcttatagagatatgcgcggggagggggcac
gaggtgtttgtcgctgatgtcgtcaacctcccgtacagggaaagtgttgctgacgccgcg
atttcgattgcggtgttgcatcatctgagtaccgaggacaggcggaggaaagccatagag
gagttgatccgtgttgtcaagagggggggtcttgtgctgatcactgtctgggctgtggag
caggaagacaagttgcttcttaacaagtggactcccttgtgcgacaagtataatgaagag
tgggttgatcccagcagtcccatggtgcgtaacaaatctgctactacgctagatagcatt
gaagagactgatgaagacatgcgcgccatcaagcaaacagatgatcagctgaaaaatagt
tttgatggtttggaggataagaccttaattatggatgagcatgacaaaacccagcaggag
tactttgttccttggcatctaccatttcaccgagcagaaattggcggcgcatctgctgtt
gctctacagaatggattggcaaagaaagatgataagaagggcactgtggtctacaaccgt
tattatcacatttttgtcgaaggagaacttcaaaggctagttgctggcatgaaaaatgca
gccatcaccgaccaattctacgacaaatcgaactggtgcatagttctggagaagctttga
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