Triticum dicoccoides (wild emmer wheat): 119318022
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Entry
119318022 CDS
T07278
Name
(RefSeq) nuclear exosome regulator NRDE2-like
KO
K26109
nuclear exosome regulator NRDE2
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119318022
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
119318022
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
HAT_Syf1_CNRKL1_N
Suf
TPR_19
TPR_15
HAT_PRP39_C
Motif
Other DBs
NCBI-GeneID:
119318022
NCBI-ProteinID:
XP_037448422
LinkDB
All DBs
Position
6A:complement(569754703..569763655)
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AA seq
1147 aa
AA seq
DB search
MEPSPERSPPTTTATAAGGGHEPSNSSSVFPLFPLSAPTEVSQCLPNPSFSFDASSLNIP
PTASSSLPPLSPSSDEEEAAPKPAPAKYNLLPSSPSDEERGSRRDDRKRRKRRREQERYE
GAASSRKPGVRAWAGSETKLVKDYYVDAKGDQDNLAFGSIYRMDIARYKPQNALETRGLN
RRFYNYGHASSQMDLDSDLDGLDNKVKVGGRYFSAKHAVLERNKGFKHLKVLKSDMIAIL
PEDFIPVETSSLPVKSTTVQQELEESWEDEILRRTKEFNKMTRECPHDEKIWLAFAQFQD
KVASSQPQKAARLQTTERKISILEKAVELNPDNEELLLCLLKSYGERDSSESLFGKWEKI
LMEHPDSCKLWKQYLLLCQGEFSRFKVSDTRKSYSYAVQALSAACTKLCRQDCENADLKA
HPSLVQVELGLVDIFVNLCRFEWQTGHRELATGLFQAQIEFSLFSPPLSLSSSSKQRLFE
HFWNSGGARIGEDGALGWSTWLGKDEESRQNMVMQENPQEPEGGGWSGWFNPSVANAETN
DVSNQSIEELAADGIDPEDPDTEDTPAQDDVESLLKKLGIDVETEYSSEVKDAKTWNRWS
TMELSRENEQWMPLRENSGAGPNHSNDASSGEVNDQLSRVILFEDVTEFLFSLSSEEARF
SLICQFIDFYGGKISRWTSSNSSSWLDRIMSLEMISNDISEDLIAISDLANKTQNSSHCS
LESLLGSMHDLSQRPGLVKFLKNAILLSLDIFPRNHILEEAVLVTTQMYTAQENTLSTPA
NASRALAKNLLKKDRQDLLLCGIYGRIEARHGNIDQARKIFDMALLSTEGATQDLVRKVP
ILYFWYAEMEISISTSRNNSDSAHRAIYILSCLGSNIKYSSFGGPISRPLVLRARQGFKE
QIRSLRSAFASGCLKEESVALICCASLFESMTSGYSSGLEVIEEACPFSESHTLEFEELW
MYYIKLLQKNLNQLSLSRVWPSILKGVQTYPYNPKSYASMLTLSCLYSVPNNLRLTLDKC
SQRDPSIVALLFALSFEWSKAGSYNRIHSLFERALADDKLQKSVLLWRCYLAYEAEIACN
TSAARRVFFRAIHACPWSKRLWLDGFQKLSSVLTMKELSDLQEVMHGKELFIRTDIYEIL
LQDEDDI
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggagccatcgccggagcgttcgccgccgaccaccaccgccaccgccgctggaggagga
cacgagccctccaactcctcctctgtcttccccctcttcccgctctctgcccccaccgag
gtttcccagtgtctcccgaaccctagcttctccttcgacgcctcctccctcaacatccca
cccactgcctcctcgtccctcccgccgctgagcccctcttcggacgaggaggaggcggcc
ccgaagcccgctcccgcgaagtacaacctgctgccgtcctcgccgtccgacgaggagagg
gggtcgaggcgggacgacaggaagaggaggaagcggaggagggagcaggagcggtatgag
ggggccgcctcttcgcggaagccgggggttcgtgcctgggctgggtcggagaccaagctg
gtcaaggattactacgtcgacgccaagggcgaccaggataacttggcatttggatcaatc
tacagaatggacattgcacgttacaagcctcaaaacgcactggagacacgtgggcttaat
cgacgtttctataattatggacatgcttcatcgcagatggatctagattcagatttggat
ggactggataacaaagtaaaagtgggagggcgttacttttcagcaaaacatgccgtttta
gaaagaaacaagggtttcaagcacctgaaagtgttgaaaagtgatatgattgcaattctc
cctgaagattttatccctgtagagacatcatcccttcctgtgaaaagcacaaccgtgcaa
caggagcttgaggaatcttgggaagatgaaatacttcggaggacaaaagaattcaataag
atgacacgagaatgtcctcatgatgaaaaaatctggttggccttcgctcagtttcaggac
aaagttgccagtagtcagccacaaaaagcagcacgtttgcaaacaactgaaagaaaaatt
agtatattggagaaggctgtggagctcaatccagataacgaggaattgttgctttgcctt
ctgaagtcatatggtgagagggatagctctgagagtctctttggtaaatgggagaaaata
cttatggaacaccctgacagttgtaagttgtggaaacagtatctacttctgtgccaaggg
gaattctccagattcaaagtatctgatacacggaagtcttactcatatgcagtacaggct
ctatctgcagcttgcacaaagctatgtaggcaggattgtgaaaatgctgatctcaaagca
catccttccttagttcaggttgaacttggtttagtggatatatttgtgaatctttgccgg
tttgaatggcaaacaggacatcgagaattagcaactgggttatttcaagctcaaattgag
tttagcctattctcgcctcccctttccctgtcctcaagcagtaagcaaagactctttgag
cacttctggaatagtggtggtgccagaattggagaagatggggctcttggatggtctaca
tggttaggaaaggatgaggagagtcgacaaaacatggttatgcaagaaaatcctcaagag
cctgaagggggaggctggagtggttggtttaatccctctgtagcaaatgctgaaacgaat
gatgtgtctaaccaatcaatagaagaattggctgctgatggaattgatccagaagaccct
gatactgaggacacacctgcacaagatgatgttgaatctttactaaaaaagctcggcatt
gatgtagagactgagtacagtagtgaagttaaggatgcaaaaacatggaatagatggtcc
acaatggagctgtcgagggagaatgaacaatggatgccccttcgtgaaaattctggagca
ggaccaaatcattctaatgatgcctcatctggagaagtcaatgatcagctttccagagta
atcttgtttgaggacgtaactgagtttctgttctctttatcgtcagaagaggctcgtttt
tccttgatatgccaatttattgatttctatggtggcaaaatttctagatggacatccagc
aacagttcaagttggcttgatagaattatgagccttgagatgatttcaaatgatatttcg
gaagatcttatcgccatatctgaccttgcaaacaagacacaaaattcaagtcattgtagt
ttggagtctttattaggaagtatgcatgatctttctcaaagacctggcctggtgaaattt
ctgaaaaatgcaatattgctttcccttgatatattccctcgtaatcatatcttggaggaa
gctgtccttgttaccacccaaatgtatacggcacaagagaacactttgtctactccagct
aatgcatcgcgggctttggccaaaaacctgctgaagaaagacagacaggatcttctgctt
tgtggtatatatggccgaattgaggctaggcatgggaacattgaccaagcaaggaagata
tttgacatggcactgttatctacagaaggagctacgcaggatctcgtcaggaaggttcct
attctttatttttggtatgctgagatggaaatatcaatatctacttctagaaacaattct
gactcggcacatcgtgcaatatacattctttcctgcttgggtagcaatatcaagtattct
tcttttggcggtcctatatcacgcccgctggtattaagggctcgtcaaggatttaaagag
cagattagaagcctgcggtctgcatttgcaagtggttgtttgaaagaagaatcagttgct
ctgatttgctgtgcttccttgttcgagagtatgacttctggttattcttctggtcttgaa
gtgatagaggaggcctgtccattttcagagagccataccttggaatttgaagagttgtgg
atgtattacatcaaactgcttcagaagaatctgaaccagttgagtctctcaagggtttgg
ccgagcatattgaaaggagtacaaacatatccgtacaatccaaaatcatatgcatccatg
ttaactctgagctgtctttacagtgttcccaacaatctgcgtcttacacttgacaaatgc
agtcaaagggacccttccatagttgccttgctgttcgctttgtcctttgaatggagtaaa
gcaggatcttacaatagaatccacagtctgtttgagagagctctagctgatgataagtta
cagaagtctgttctgttgtggcgctgttatctagcttatgaggcagagatagcctgtaat
acttctgcggcacgacgtgtgttcttcagagctatacatgcttgcccatggtctaaacga
ttatggcttgatgggttccaaaaattgagctcagttctgactatgaaagagttatcagat
ctccaggaagttatgcatggcaaggaattgttcattcgcactgatatctatgagatactg
ttacaagatgaagatgacatatga
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