Triticum dicoccoides (wild emmer wheat): 119318240
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Entry
119318240 CDS
T07278
Name
(RefSeq) E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119318240
Enzymes [BR:
tdc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119318240
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119318240
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
RING_XB3-XBAT31
zf-RING_10
zf-rbx1
zf-Nse
Prok-RING_4
zf-RING_6
Zn_ribbon_6
Sina_RING
zf-RING_4
zf-ANAPC11
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
119318240
NCBI-ProteinID:
XP_037448659
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All DBs
Position
6A:complement(593589270..593592972)
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AA seq
252 aa
AA seq
DB search
MSNTSGARRAARRQSLDGSADKVVVDLDASSPVAGNHHGLSVFPGARTSPIDVEALDDEV
QALSPSQVPPPGVNRRTRGQPVTQFSLDEDAVLEENWRIIRQCATPFYLDEDAAMEENRR
TRNQFLTPLYLDEDAALEDNAAMPSHNTWNKRQRVAPLICLSPEREEGSSLQSNNAVQIS
QEPAKVVVPKEPNFTCPVCLNKLVEPSTTKCGHIFCAECIKQAIQFQKKCPTCRKALRKN
NFHRIYLPNSDG
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataccagcggcgcacggcgtgccgcgaggaggcaatcgctggatggatctgct
gataaagttgttgtggacttggatgcaagctcgccggtggcggggaaccatcatgggctc
tcggtcttccctggtgcacgcacatcgcctattgatgtggaagctctcgatgatgaagtg
caggccctatcgccttcacaagtgcctcccccgggggtgaaccggagaactagagggcaa
cctgtgacacaattttctctggatgaagatgctgtcctggaagagaattggagaattata
aggcaatgtgcgacaccattttatcttgatgaagatgctgccatggaagagaatcggaga
actagaaatcaatttttgacaccactttatctggatgaagatgctgccctggaagataat
gcagctatgccttctcataacacgtggaacaaacgccaaagggttgcgcctttgatatgt
ctctccccagaaagggaagaagggtccagcctgcagtcgaacaatgcggtgcaaattagc
caagagcctgctaaggtggtggttccaaaggaaccgaatttcacttgcccggtgtgcctt
aacaagctggtggagccttcgacaacaaaatgtggccatatcttctgcgcagagtgcatc
aagcaagccatccagtttcagaagaaatgccctacttgccgcaaggccctgaggaagaac
aacttccatcgtatttaccttccgaactcagatggttaa
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