Triticum dicoccoides (wild emmer wheat): 119318310
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Entry
119318310 CDS
T07278
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119318310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119318310
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119318310
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119318310
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
119318310
NCBI-ProteinID:
XP_037448733
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All DBs
Position
6A:complement(600133806..600141211)
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AA seq
289 aa
AA seq
DB search
MAMSDLAAAVISKANGGVDGEEPVEIREVWADNLEAEFALIRDVVDEFPFVAMDTEFPGI
VCRPVGAFRSPADYNYATLKANVDMLHLIQLGLTFSGPTGELPALGAGRRRCVWQFNFRE
FDDERDIFATDSIELLRHSGIDFRRNAERGVDARRFAELLMSSGVVLNDAVYWVTFHAGY
DFGYLLKILTCNSLPDTQAGFFKLMKIYFPTVYDIKHLMKFCNSLHGGLNKLAELLDVER
VGESHQAGSDSLVTSCAFWKLKDSFFAGSTEKYAGVLYGLNAENGVSAH
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgtcggatctcgcggccgcggtgatctccaaggccaacggaggcgtggacggc
gaggagccggtggagatccgggaggtgtgggcggacaacctggaggcggagttcgcgctg
atccgcgacgtcgtcgacgagttccccttcgtcgccatggacaccgagttcccgggcatc
gtctgccgccccgtcggcgccttccgctccccggccgactacaactacgccaccctcaag
gccaacgtcgacatgctgcacctcatccagctggggctcaccttctcgggccccacgggc
gagctccctgccctcggcgccggacgccgccgatgcgtctggcagttcaacttccgggag
ttcgacgacgagcgcgacatcttcgccaccgactccatcgagctgctccgccacagcggc
atcgacttccgccgcaacgccgagcgcggcgtcgacgcccgccgatttgcggagctgctc
atgtcctcgggcgttgtgctcaatgacgccgtctactgggtgaccttccacgcgggatac
gacttcggctacctgctcaaaatcctcacctgtaacagcctcccagacacacaggctggg
ttcttcaagctgatgaagatatatttccccaccgtctatgacatcaagcatctcatgaag
ttctgcaacagcctgcacggcgggctgaacaagctcgccgagttgctcgatgtggagcgt
gttggagagtcacatcaggccgggtccgatagcctggtcacgtcttgtgcgttctggaaa
ctcaaggattccttctttgctggatcaaccgagaaatatgcaggcgtgctgtatgggctc
aatgcagagaatggtgtcagtgcacattga
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