KEGG   Triticum dicoccoides (wild emmer wheat): 119318770
Entry
119318770         CDS       T07278                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03020  RNA polymerase
tdc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    119318770
  09124 Replication and repair
   03420 Nucleotide excision repair
    119318770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tdc03021]
    119318770
   03400 DNA repair and recombination proteins [BR:tdc03400]
    119318770
Transcription machinery [BR:tdc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     119318770
DNA repair and recombination proteins [BR:tdc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      119318770
SSDB
Motif
Pfam: RNA_pol_Rpb4 FoP_duplication
Other DBs
NCBI-GeneID: 119318770
NCBI-ProteinID: XP_037449260
LinkDB
Position
6A:complement(36847363..36853488)
AA seq 225 aa
MANRGGKGSYPPSKSGALNGRQMVLISDDSDSDDFFEEEAPPTHSKSNGKASSDSLKTGG
KASSFSNGEGSKGGKAFSAGKGGKGSASNAKPAMSDAELKLQLDMSPNSILLTNCEAAEM
LQKIQGHMAILSEDPKIKIPESFDKAFQYAKEGNHFTSAKLVKEILEPLKDYGVNDGEIC
MIANIGPETIEEVYALIPSLKATRSINEGKIAEALTALANIKASK
NT seq 678 nt   +upstreamnt  +downstreamnt
atggcgaacaggggagggaaggggtcgtaccccccgtccaagtcaggagcactgaacgga
aggcagatggttctgatttctgatgattctgattctgatgattttttcgaagaagaggct
ccccccacacactccaagtcaaatgggaaagcttcatctgatagcctaaaaactggtgga
aaggcttcatccttttctaatggagaaggtagcaaaggagggaaggcatttagtgctggg
aagggtgggaagggctccgcatcaaatgcaaagcctgcaatgtctgatgcagaactaaag
cttcagcttgatatgtctccaaattctatattgttaacgaactgtgaagcagcagaaatg
ttgcagaaaattcagggacatatggctatcttatcagaggatccgaagataaaaattccc
gagtcgtttgacaaggcctttcaatatgcaaaagaaggaaatcacttcacctctgcgaag
ttggtgaaagaaatcctggaaccccttaaagactatggtgttaatgatggcgagatatgc
atgatagcgaacattgggcctgagaccattgaagaggtttatgcactcataccgtctctc
aaggccactaggtcgatcaatgaaggcaagatcgcggaggcccttaccgccctcgctaac
ataaaagcctccaagtga

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