Triticum dicoccoides (wild emmer wheat): 119319164
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Entry
119319164 CDS
T07278
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119319164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119319164
Enzymes [BR:
tdc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119319164
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
HECT type E3
119319164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
HEAT_2
TFIIA
Adaptin_N
KH_DEAH11
Motif
Other DBs
NCBI-GeneID:
119319164
NCBI-ProteinID:
XP_037449548
LinkDB
All DBs
Position
6A:complement(2097186..2106525)
Genome browser
AA seq
1683 aa
AA seq
DB search
MQLCEMLSIGTEDSLAAFPVDAFVPLLVGLLREEDGPGASPEVMLLAARALANLVDVLPS
ACSSVVHYGAIPCFCARLLTIEYMDLAEQSLQALRKISLEHPTACLRAGALMAVLSYLDF
FSTGVQRVALSTAANICRKLPSDASEFVMEAVPLLTNLLHHHDSKVLEHASVCLTRIAEA
FAHHPEKLDELCNHGLVAQAANLVSISNSPGQTSLSTSTYTGLIRLLSTCASGSLLAAKT
LLLLGISGTIKEILSGSGLVAGTSVAPALSRPADQMFEIVSLADDLLPHLPVGIISLPTN
CRVFIKGSSTRRPAPTKQDGAGSTENERSGHESLLQEHPELLQQFGMDLLPVMTQVYGSS
VNAPIRHKCLSIIGKLMCYSSAEMIQTLLSTTNISSFLAGILAWKDPQVLIPALQIAEIM
MEKLPETFSKLFVREGVVHAVEALICPESSNMVPPQVPPQDKDGDSVMSSRPRRQRRRGG
AAPTENSLLDVSNASNSGIASASPCSTEVPVTSLRFEVSDRAKSFKDKYFPSDHGSSDAG
VTDDLLKLRALCAKLNTATDNVITKAKGKSKALSPSHFDISHDVDEQLDLIVNEMLAELS
KANGVSTFEFIRSGVITSFLDYLSCGTFGKEKVSEANLPKLRQQALRRYKSFISVALSAD
HERDETPMTLLVQKLQSALCSLERFPVVLSQSNRIGTGGSRLTSGLGALAQPFKLRLCRA
QGEKSLRDYSSNIVLIDPFASLAAVEDFLWPRVQRGEAASKPPVASANNSESGTPGAAAG
GSSTPASARRPTTRSKSSAASAGTSSKESLEESTSSAKAKGKAVVKPSSAEPKGPNTRNA
TRRKSALEKDLDMKQTHGDSSSEDEELDTSHIELDDALMIDDDDISEDEDDDHEVLQEGS
LPICVQDGVHDVKLGDADDSNVGSASDSQAQPSSGSGSSARNIMGRGVNAAEFRTAGAFG
SQGAMSFVAATMAGLTSGGGRGVRGGRDRRGLSLGGSMSEHNKLIFMAGGKQLSKNLTVY
QAIQRQLMLDEDDEERFNGSDLPNDGNRFWGDVFTITYQKADSQAEKGSQGSSASLHQKS
ESGRSVSEAHKVSLLDSILQGELPCDLEKTNSTYSILALLRVLEGLNQLSPRLRAQTASD
DFAEGKIATLDELYEAGTKVPSEEFVNSKLTPKLTRQMQDVLALCSGSLPSWCNQITKAC
PFLFPFETRRQYFHSTAFGLSRALNRLQQQQGDNPNTGSEREVRFGRLQRQKVRVSRNRI
LDSAAKVMEMFSSQRAVLEVEYFGEVGTGLGPTLEFYTLLGHELQNARLGLWRSSSPYDY
SEMEIDKNGVIHVDSDDDLPAPQKLNSSEDARNLVQAPLGLFPRPWPSNVDTSEGSRFFK
VVEYFRLVGRVVAKVLQDGRLLDLPLSTAFYKLILGQELDLFDIISFDAELGKTLQELQV
LVERRRFLESTCGKDQLEVADLRFRGAPIEDLCLDFTLPGFPDYILKEGEQNTIVNIHNL
EEYVSLVVDATVKSGIMKQVEAFRSGFSQVFDISSLQIFSPQELDYLICGRQEIWEAESL
VDNIKFDHGFTAKSPAIINLLEIMAEFTPDQQHAFCQFVTGASRLPTGGLAALSPKLTIV
RKHPSSGVSTLNTSGVTDAADDDLPSVMTCANYLKLPPYSTKEVMRKKLLYAILEGRGSF
DLS
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atgcagctctgcgagatgctctccatcggcaccgaggactcgctggccgccttccccgtc
gacgccttcgtgccgctcctcgtcggcctgctccgcgaggaggacggccccggcgccagc
cccgaggtcatgctgctcgccgcgcgcgccctcgccaacctcgtcgacgtgctgccctcc
gcctgctcctccgtcgtgcactatggcgctataccgtgcttctgcgcccggctcctcacc
atcgagtacatggacctcgccgagcagtctctgcaagctcttaggaagatttccctcgag
catcctactgcatgtttgagagctggtgcgctaatggccgtcctgtcgtatctggacttc
ttctccactggtgttcagagagttgcactgtctactgctgccaatatttgcaggaagctg
ccatccgatgcatccgagttcgtcatggaagctgtaccgttgctcactaatctcctacac
caccatgactctaaggtactagagcatgcttctgtttgtttaacacgcattgcagaggcc
tttgctcaccatcctgagaagttggatgagctgtgcaatcatgggctggttgcgcaagct
gctaacttggtatccatcagcaactccccaggccagacatcgctcagcacatcgacatat
acgggtttaatccgtcttctctcaacttgtgcgagtggatcgctgttggcagccaaaaca
cttcttcttcttggcattagtggcaccattaaagaaattctttcagggtctggtttggtt
gctggaacgtcagtcgccccagctttgtcaaggcctgctgatcagatgtttgagatcgtg
agccttgctgatgatttgctcccacatttgcctgtggggataatttctttaccaacaaac
tgtcgtgtatttattaaaggctcttctacaaggagacctgctcccaccaaacaagatggg
gctggttcaacagaaaatgagaggtcaggccatgagagtctattacaggagcaccccgaa
cttctacaacagttcggtatggacttattgcccgtaatgacacaggtgtatggttcaagt
gtaaatgcaccaatacgtcacaagtgcttatctatcattgggaaattaatgtgctatagc
tctgctgaaatgatccagactctccttagcacgacaaacatatccagcttcttagcaggc
attcttgcttggaaagatccacaagtgctgattcctgctcttcagatagcagaaattatg
atggaaaaacttcccgagacattctccaagttatttgtgagggaaggtgttgttcatgct
gtggaagcacttatatgtccggaatcctcaaatatggtgcctcctcaggtaccaccacag
gataaggatggcgattctgttatgtcctcacgccctagacgacagcgtcgtcgtgggggt
gctgcacctacagagaacagtttgttagatgtgtcaaacgcctccaattctggcattgcc
agcgcatcgccatgctctacagaagttccagtcaccagtctccgttttgaagttagcgat
cgtgcgaagtcgttcaaagataaatacttcccttcagaccatggttcaagcgacgctgga
gtcactgacgaccttcttaagctgagagcactgtgtgcaaagttgaatactgcaactgac
aatgtcataacaaaagccaaagggaaatcaaaagccttgagccctagccattttgacatc
tcacatgatgtggatgaacagttagacctgatagtaaatgaaatgcttgctgagctaagc
aaagctaatggtgtctccacatttgagttcatcaggagcggagttatcacatcattcctt
gactatttgtcatgtgggacattcgggaaggagaaggtatccgaagcaaacctgccaaag
cttcgccagcaggcgcttaggagatacaagtccttcatatctgttgccctttctgccgac
catgaaagggatgaaactccaatgactctcttggtccaaaaactgcaaagtgcattatgt
tcgttggagcgtttccctgttgtgctcagccagtctaacagaattggtactggcggctcc
cgtctgacctcaggtcttggcgctctagctcaacccttcaagttgcgcctgtgtcgagct
caaggcgaaaaatcacttcgggattattcatcaaatattgtacttatcgatccctttgcg
agtctggcagccgtcgaagattttctttggcccagagttcagcgcggtgaggctgcttcc
aaacctccagtcgcttctgcaaataattctgaatctggtacacccggtgccgctgctggt
ggatcatcaacacctgcatcagcccggcgtccaacaacaagatcaaagtcatctgctgca
agtgctggtacatctagtaaggagtctctagaggaaagcactagtagcgcaaaggcaaaa
ggcaaagctgttgtaaaaccaagctcagctgaaccaaaaggaccgaacacaaggaatgct
acccgcagaaaatctgccttggagaaagatttggacatgaagcaaacacatggtgacagt
agttctgaggatgaggagctggacacatctcatattgagcttgatgatgctttaatgatt
gatgatgatgacatttcagaggatgaagatgatgatcatgaggttctgcaagagggctct
cttcctatttgtgttcaagatggggtgcatgatgtgaagttgggtgacgctgatgactcc
aatgttggttcagcaagtgatagccaggcgcagccatcatctggttctggttccagtgct
agaaacattatgggcaggggagtaaatgctgctgaatttcgaactgcaggtgcctttgga
tcgcaaggggcaatgtcatttgttgctgcgacaatggctgggctgacttctggtggtggt
cgcggtgttagaggtggtcgtgatcggcgtggcctgtcacttggaggcagcatgagtgag
cacaacaaactgatattcatggctggcgggaagcagcttagcaaaaatttgaccgtatat
caagcaatccaacgtcaactgatgctcgacgaggatgatgaagaaaggttcaacgggtct
gacctaccaaacgatggaaaccgattctggggtgacgtgttcacgataacttaccagaag
gctgatagccaggctgagaagggatcccaaggtagttctgcctcattgcatcaaaagtca
gaatcaggcagatctgtttctgaagcacacaaggtttctcttcttgatagcatcttacaa
ggggaacttccatgtgatttggagaaaacaaactcaacttacagcattttagcgttgtta
cgtgtattagaggggctgaatcagctatcccctcgtttaagagcgcagacagcatctgat
gattttgctgaggggaaaatcgctactctggatgagctatatgaagctggaaccaaggtg
ccttcagaagagttcgtcaacagtaagttgacaccgaagcttactcggcaaatgcaggat
gttcttgcactctgcagcggcagtttaccttcttggtgtaatcagatcactaaagcctgt
ccctttctgttccccttcgaaacgaggaggcagtacttccattccacagcttttgggttg
tcccgggcgttgaatcgacttcagcagcaacagggtgataatcccaacactggcagcgaa
agagaggtccgatttggcaggcttcaacgccagaaggtccgtgtttcccgtaaccgcatt
ctggattctgccgccaaagttatggagatgttctctagtcagagagctgttcttgaggtg
gaatactttggtgaggttgggacagggctgggtcctacgttggagttctatactctcctg
ggccatgaactgcagaatgctcggttgggattatggagatctagttcgccttacgattat
tcagaaatggaaatcgataagaatggtgtgatccatgtggattctgacgatgatttgcca
gctcctcaaaaactcaactcatccgaagatgcccggaatctggtacaagctcctcttgga
ttatttcctcgcccttggccatctaatgttgatacctcggagggtagcagattcttcaaa
gtcgtagaatatttccgcttggtcggtcgagtcgtggcgaaagtcttgcaggatggaagg
ctcttagatttgcctttgtcaacagcattttataagctcatacttggacaggagcttgat
ttattcgacattatctcgtttgatgctgagcttggaaagacactgcaagaactgcaagtt
cttgttgagcgtaggaggttccttgagtccacttgtggcaaggatcagctagaagttgca
gacttgcgtttccgtggagctcctatcgaggacttgtgtttagattttactcttccaggt
tttcctgattatattctcaaagaaggcgagcaaaacacaattgttaatatccacaaccta
gaggagtatgtttctttggtagtcgatgcgacagtgaagtcagggattatgaagcaggtt
gaagctttcagatcaggttttagccaggtctttgatatctcatccctccaaatattttca
cctcaagagcttgactatctaatatgtggtcgtcaagaaatatgggaggctgaatcactg
gtggataacatcaaatttgatcatgggtttactgctaaaagtcctgccattataaatcta
ctcgagatcatggcggaatttacccctgatcagcagcatgcattctgccagtttgtaact
ggtgcttctcggcttccaactggtggtttggctgcccttagtcccaagcttaccatagtt
cgaaagcacccctcgagtggggtgagtactttgaatacaagcggggtaacagacgctgcg
gatgacgatttgcccagtgtcatgacatgtgccaattatctcaaactacccccatattcc
acaaaagaagtcatgcgcaagaagctgctctacgccatcctagaaggccgtggatctttt
gatctatcctga
DBGET
integrated database retrieval system
