Triticum dicoccoides (wild emmer wheat): 119319182
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Entry
119319182 CDS
T07278
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119319182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119319182
03110 Chaperones and folding catalysts [BR:
tdc03110
]
119319182
03029 Mitochondrial biogenesis [BR:
tdc03029
]
119319182
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tdc04147
]
119319182
Enzymes [BR:
tdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
119319182
Messenger RNA biogenesis [BR:
tdc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
119319182
Chaperones and folding catalysts [BR:
tdc03110
]
Heat shock proteins
HSP60 / Chaperonin
119319182
Mitochondrial biogenesis [BR:
tdc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
119319182
Exosome [BR:
tdc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119319182
Exosomal proteins of other body fluids (saliva and urine)
119319182
Exosomal proteins of breast cancer cells
119319182
Exosomal proteins of colorectal cancer cells
119319182
Exosomal proteins of bladder cancer cells
119319182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
YIEGIA_cap
Motif
Other DBs
NCBI-GeneID:
119319182
NCBI-ProteinID:
XP_037449562
LinkDB
All DBs
Position
6A:3032966..3037876
Genome browser
AA seq
598 aa
AA seq
DB search
MASPFGAASSCGLKAAAPSGFVTRKQLSLVSPPLVSLPQRVRPGRRCSFRVNAAKELYFN
KDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAKEVELEDPVE
NIGAKLVRQAAAKTNDLAGDGTTTSVILAQGMIAEGVKIVAAGANPVQIARGIEKTTKAL
VSELRKMSKEVEDSELADVAAVSAGNNYEIGNMIADAMSKVGRQGVVTLEEGKSAENNLY
VVEGMQFDRGYISPYFVTDSEKMSVEYENCKLLLVDKKINNARDLITLLEDAIKGGYPIL
IIAEDIEQEALATLVVNRLRGALKIAAIKAPGFGERKSQYLDDIATLTGGTVIREEIGLS
LDKADKEVLGNAAKVVITKDSTTIVGDGTTQEEVTKRVTQIRNQIEASEQEYEKEKLNER
IAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDA
IKETLENDEQKVGAEIVRKSLSYPLKLIAKNAGVNGSVVTEKVLVNDNFRYGYNAATGKY
EDLMAAGIIDPTKVVRCCLEHAASVAKTFITSDAVVVDIKESEQAPAANPMAGSGYGF
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaccgtttggggccgcctcctcgtgtggcctcaaggctgccgctccttccgga
ttcgtgaccaggaagcagctctcccttgtttcgcccccgctggtctcgctgccccagagg
gtcaggccagggagaaggtgcagtttccgagtgaacgctgcaaaggagctgtatttcaac
aaggatgggtcggctatcaagaagctgcaaactggagtcaataagcttgctgatctggtt
ggagttactcttggcccaaaaggacgcaatgtcgtccttgagagcaagtatgggtcacct
agaattgtcaatgatggcgttacggtggcaaaagaggttgagctggaggaccctgtcgaa
aatattggagctaaattggtcaggcaagctgctgctaagaccaatgatttggctggtgat
gggacaaccacttctgtcatccttgctcaagggatgattgccgagggtgttaagattgta
gctgccggtgctaatccagtacagatcgcccgtggtattgagaaaacaaccaaagcactt
gtcagtgaacttcgaaagatgtccaaggaggttgaagatagcgaacttgctgatgttgct
gcagtaagcgctggaaataactacgaaattggtaacatgatagctgatgctatgagcaag
gttgggcgtcagggggtggttacacttgaagaaggcaagagtgctgaaaacaacctctat
gtggtcgaagggatgcaattcgaccgcggctatatttctccttactttgtaactgacagt
gaaaaaatgtcagttgagtatgagaattgcaagctgcttcttgtggacaagaaaattaac
aatgcccgagatctcatcactcttctggaggacgctattaagggtggatatccaattcta
ataatcgcagaggatattgagcaggaagctcttgcaactcttgtggtcaataggcttaga
ggtgcactgaagattgctgctattaaagcccctggttttggagagcgcaagagtcaatac
ctggatgatatcgctactctgacaggaggcactgtcatcagagaagaaattggactgtcc
ctggacaaagcagacaaagaagtccttggaaatgccgccaaggttgtaattactaaggat
tcgacgacaattgttggagatggcactacgcaggaggaagtaaccaaaagggttacacaa
atcaggaaccaaattgaggcttctgaacaggaatatgaaaaagaaaagctaaacgagagg
atagctaaactatccggtggtgttgctgtgattcaggttggagcacagactgaaactgag
ctaaaggaaaagaaattgagggttgaagacgcactgaatgcaacaaaggcggctgtcgag
gaaggtattgttgtcggtggtggctgtacccttttaaggcttgcctcaaaagttgatgcc
attaaagaaacccttgagaatgatgaacagaaggtcggcgctgaaattgttaggaaatcc
ttgagttatccacttaaactgattgccaaaaacgctggtgttaatggcagcgtggttacc
gaaaaggtccttgtgaatgataacttcaggtacggttacaatgccgctacagggaagtat
gaggatttgatggctgctggtattattgatcccaccaaggtcgtgaggtgctgcttggag
catgccgcatcggtggccaagactttcatcacctcagacgccgtcgtggtcgacatcaag
gaatctgagcaggcacctgctgcgaacccaatggccggttcaggttacgggttctaa
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