KEGG   Triticum dicoccoides (wild emmer wheat): 119320242
Entry
119320242         CDS       T07278                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
  KO
K20178  vacuolar protein sorting-associated protein 8
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    119320242
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tdc04131]
    119320242
Membrane trafficking [BR:tdc04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    119320242
SSDB
Motif
Pfam: TPR_Vps8 Beta-prop_VPS8 VPS8_N Beta-prop_EML_2 Beta-prop_EML Beta-prop_HPS5 WD40_CDC20-Fz ANAPC4_WD40 TPR_VPS8_2 WD40_WDHD1_1st WDR55 Clathrin TPR_Vps41 WD40_Prp19 WD40 Beta-prop_TEP1_2nd Beta-prop_IFT140_1st zf-RING_2 zf_RING_Vps8
Other DBs
NCBI-GeneID: 119320242
NCBI-ProteinID: XP_037450268
LinkDB
Position
6B:complement(101022428..101036429)
AA seq 1921 aa
MPSSSPAMATQPPPRPPAQELDLDAFLPYSPASSSASDADADHRRAVDDLLLLLSSSDSE
GDDEPTRTPATNLKPLTSIKAPPPPPKPSPPSPLPSPSASPGRSTSASPSTTLSSLVSRT
FSSNAASSSTSSARPLPSLFRGVRPSPKPGAALAAAAAASRAVLTPHAAAIKSRRTASAP
IDKLLDEGSGSEASEGILSTGNLEAEEVAEKVSEEVVARVTEEAVGGSGDEELEEDKHGE
VGTEENSEPSELVDLGDVDSVAVDNVNEQEQLGGENLAETYQAGSQIGLVDEENSDEQLS
DGNLAEAGEIVDQDGSVSEEKTDDGLEVELSGTDLEEQLESESIIDKVIEERLEISRMAE
KNAERRPKVPMKPLERAEELEKRQASFGQHWEEGAAAQPMHLEGIGKGQPAIGYMQIEVD
NPITRAMSSPSFRQDHGSPQVLAVHRSYIAMGMSTGSVIIVPSKYSIHQADDTDAKMLFF
WNQGEKTQSPVTAMCFNPQGDLLLVGYGDGHMTIWDVQKATAAKVIYGEHTGAVVHVCFI
RQSKAITGDSKGLVLLHTFSIIPVINRLTVKGTQRLFDGNTGIVLSACPLLADESFGSGN
SSTQVNLPTSSSGGLGSMMGGVVGVDSGWKFFNEGSSPLEDGVTVMFIMHQHALVVRLRT
NIDHVEHIETFSRPEGAREGSIAYAAWKYTSSSTDSSPIDEERVSWLALAWDRQVQVAKF
VKSKMIRHKDWKLDSAAVGVAWLNDQMLAVLNLKGQLCLFSKDGSELRRTIFTLDGFVFD
DSILYHTHFSNRFGNPERHFNNSVAVRGATVYILGPSFLTVSRLLPWKERIEALKMAGDW
MGALDMAMKLYDGHTQGVVDLPRTVDSIRGAIMPYLVELLLSYIGYVFEYISIALSNHTG
KGGAADGLIDADRSLLTQREEQYARVGGVAVEFCVHIGRNDILFDTVFSKFVAAQSGGIF
LEVLEPYILKDMLGSLPPEIMQALVEHYSGKGWLQRVEQCILHMDISSLDFNQVVRLCRE
HGLYGALIYLFNQGLNDFRTPLEELLSVIQNATRKDATSTCYRMLVYLKYCFQGLAFPPG
HGIIPRAQLHAVRKELLQFMLEDSKMLTSEVFKGFSSSSGKCPNICYLLWMDTEATLEVV
KCAFAQENLEPTSSTLDSSVSKDEEDTDIESPDSQNILLQSVVDTIIRIAGLENEAIHSV
VVGTAESEESELWPSVSDFGHIIEFVSFFVSHKRANASQRVLKHILKYLTSSTTSYDDKK
MPPQKEVLQLFNVVSQTDWNSDYVLNLCLDAHFHQACGMIYTARNQNLAALDSYMKDTME
PYHAFIFINKKLLQLASDEALSFRSTVISRFAELVNLSRECAFVLVIDHFHDEIQQILAE
LHSDHRSLFLFLKTAIEVHLSGKLDFSELTAINYEIVESLYSGELEDYLQRLSNLPKLFD
RNPISMTDKLVELYLELLCQYEPRSVLKFLETFDSYRLERCLLLCLDYGVTDAAAFLQER
VGDVASALELVLAGLDEKVNQFIASVENVFSRTSSKSISEIEQPDIVLNMSEARPVLDVL
RSSIGLCQRNSQRLDPEESQLLWFQLVDSFSDPLKKLYGSKVVNEKGCWSVGGETTNGHP
AGKGFSQKMVNSAYQRCLNTLRRVFSQFVGEIIEAMAGYIPLPAIMAKLLSDNGSQEFGD
FKLVIHRMLSMYLYEKRILETAKSVIEDDSFYTLSLLKRGVCHGFAPQTFVCCVCNCSLS
KEGAISAVRVFSCGHATHLHCESEQSKSSNKDFKDGCPVCLSMSDTQARNKSPIIAENGL
SKYPVVEHEVPYGVHHNHETDHVERSRGLHQMSRFEILNNLQKGQKSFHIETVPPLKLSP
PAIYHEKIQKKVSLVGESSRQSVRSEKPQKIWHMKEPKSKKSGNWLPPKSSIFSSDKNQV
W
NT seq 5766 nt   +upstreamnt  +downstreamnt
atgccgtcgtcgtcgccggcgatggcaacccagccaccgccgcggccaccggctcaggag
ctcgacctcgacgccttcctcccgtattctcccgcctcctcctcagcctccgacgccgac
gccgatcaccgccgcgccgtcgacgacctgctgctcctcctctcctcctccgactccgaa
ggagacgacgagccaacccgtacgcccgccaccaacctcaaacccctaaccagtatcaaa
gccccaccgccgccccctaaaccttctcccccatctcctctgccatcgccttccgcttcg
cccgggagatccacatccgcatcgccgtcgacgacgctctcctccctcgtctcgagaacc
ttctcgagcaacgctgcttcctcgtccacctcctcggcgaggccgctcccctcgctcttc
cggggtgtccgccccagccccaagcccggcgccgccctggccgcggcggcagccgcgtcc
cgcgccgttctcaccccgcacgccgctgcaattaagtcgcggcgcaccgcctccgcgccc
atcgataagctcctcgacgagggctccggctccgaagcctccgaggggatcctttccact
ggaaatctcgaagcagaggaagtagctgagaaggtcagtgaggaagtggttgctagggtg
accgaggaagctgtcggtgggagtggggatgaagaattggaagaggacaagcacggggaa
gtggggactgaagagaattccgagccctccgaattggtggacctaggcgatgtcgattct
gttgctgtggataatgtcaatgagcaggagcaacttgggggcgagaatttggcagaaaca
tatcaagctgggagtcaaattgggcttgttgatgaagaaaatagtgatgagcaacttagt
gacggaaatttagcggaagctggtgagattgtggatcaagatgggtcagtttccgaggaa
aagaccgatgatggtctggaagttgaactttctggcactgatttggaagagcaactggaa
tctgagagcatcattgataaggtgattgaagagaggttggagatcagcaggatggctgaa
aaaaatgcggagagaaggccgaaggtaccgatgaaaccattggagcgggctgaggagctt
gagaagagacaggcctcatttgggcagcactgggaggagggagcagcagcgcaacccatg
cacctggaggggattgggaaggggcaaccagctattggttacatgcagattgaggtggac
aacccaataactcgtgccatgtcatctccgtcttttagacaggaccatggctctccccag
gtcttagcagtacataggagctatattgccatgggcatgtccactggatctgttatcatc
gtcccaagcaaatactccatccatcaagctgatgatacagatgcaaagatgctgttcttt
tggaaccaaggtgagaaaacccaatcaccagtgactgccatgtgctttaacccgcaaggg
gatcttctgctagtaggatatggtgatggtcatatgacaatttgggatgtacagaaggct
actgcagcaaaagtcatatatggtgaacatacaggagctgtagtgcatgtttgttttatc
cgccaatctaaagccatcactggtgattcaaaagggcttgttcttctgcacacattctct
attatccctgtcattaatcgcttgactgttaagggaactcagcgcctttttgatggaaac
actggaatcgtgctctcagcctgtcctcttctagcggatgaatcctttggttctggcaac
tcatctacgcaggtcaacctaccaacttcctccagtggtggtcttgggagcatgatgggt
ggtgtagttggagtagattctggatggaagtttttcaatgaaggctcttctccattggag
gatggtgttacagtcatgttcattatgcatcaacatgctcttgtggttagactccgtacc
aacattgaccatgttgaacatattgagaccttttctagaccagaaggagcacgcgaaggg
tcaattgcttatgctgcatggaaatacacatcgtcctccactgattcgtcgccaattgat
gaagagcgagtatcttggcttgcgcttgcatgggaccgtcaagtacaagttgcaaaattt
gttaaatcaaagatgatcagacataaggactggaagcttgatagtgccgctgttggcgtt
gcctggttaaatgatcagatgttagctgtccttaacttgaaagggcagctctgtttgttc
tcaaaagatggcagtgagcttcgcaggactatctttactcttgatggttttgtcttcgat
gacagcatactgtaccatacacatttttctaacaggtttggcaaccctgagaggcatttt
aacaactcagtagcagtaagaggtgctacagtatatattcttggcccaagctttcttaca
gtttcgcggcttcttccatggaaagagcggattgaagcactaaagatggctggtgattgg
atgggtgcactggacatggcaatgaagctttatgacggtcacacacagggtgttgttgat
cttccgagaacagttgattctataaggggagccataatgccgtatttagtagagttgctg
ctatcatatataggttatgtctttgaatatatttcaattgcattgtcaaatcatactgga
aaggggggagcagcagatggcctgatagacgccgatagatccctgctgacacagagagaa
gaacaatatgctcgtgtaggaggggttgcagtcgagttttgtgttcacattggacggaat
gacatcttgtttgatacagtcttctctaagtttgttgctgcccaaagtggaggtatattt
ctggaggtactagagccatatatattgaaagatatgctgggttctttaccccctgagatc
atgcaagctctggtggagcattatagtggcaaaggatggttgcagcgagtcgaacaatgc
attcttcatatggatatttcatcactggattttaatcaggtagtcagactgtgtcgtgag
catgggttatatggtgctctaatttatttatttaaccaagggttgaatgatttccgtaca
cctctagaggaacttctatctgtcatccagaatgctactcgaaaagatgctacttctact
tgctacagaatgcttgtttatctgaagtattgcttccagggcctagcatttcctccaggg
catggaataattccccgagctcagcttcatgcagtgagaaaagaacttctgcaattcatg
ctcgaggactctaaaatgctcacttctgaagtatttaagggttttagttcttcttctgga
aaatgcccaaacatatgctatctactatggatggatacggaagctactttggaagttgtc
aagtgtgcttttgcacaagagaatttggaacctacttctagtactcttgattcatctgta
tctaaggatgaagaagatactgatattgaaagcccagatagtcaaaatattttgttacaa
agtgtagttgacaccatcatccgtattgctggtttagaaaatgaggcgatccattccgtt
gttgtgggtactgctgagtcagaagaatcggaactttggccttcagtgagtgacttcggt
catatcattgaattcgtgtccttttttgtttcccataaaagggcaaatgcatctcaaaga
gttctcaagcacattcttaaatacctcacgtcatccactacatcatatgatgataaaaag
atgccacctcagaaagaagttcttcagctcttcaacgtggtttctcaaactgactggaat
tctgattatgtgttgaatctttgtttagatgcccattttcatcaggcctgtggcatgata
tatacagccagaaatcaaaatttggctgctttagatagttacatgaaggatacaatggaa
ccataccatgcatttatcttcatcaacaaaaagttacttcaattggcaagtgatgaagct
ttgtcgtttcgttccacagtaatatctcgttttgctgagctagtcaacctaagcagggag
tgtgcatttgtcttggtcattgatcattttcacgatgagatccagcaaatattggcagag
cttcattctgatcaccgcagcctctttcttttcttgaaaactgcaatcgaagtacacttg
tcaggaaaacttgacttcagtgaacttactgccataaactatgaaattgttgaaagtctg
tactctggcgaactcgaagattatctccagagattatcaaatctcccaaagttgtttgac
cgcaatcctatttctatgactgataagttagttgaactctatctggagcttctgtgtcag
tatgaaccaaggtcagttctgaagtttctggagactttcgatagctacagattggagagg
tgtttgctcctttgtctagattatggagttacagatgctgctgcatttctgcaagagagg
gttggtgatgttgcgagcgcgttggaacttgttctagctggactagatgagaaagttaac
cagtttatcgcttcagtggaaaatgtgttctctcggacatcgtctaagagtatctctgaa
attgagcaaccagacattgttctaaacatgagcgaggctcgtcctgtgcttgatgtgtta
cgttcctccattggattgtgccaaaggaattcacagcgtttagatccagaggagtctcag
ttactttggtttcaacttgttgactctttctcagatccactgaaaaagttgtatggaagc
aaggttgtaaatgaaaaaggttgttggtccgtgggtggtgaaacaacaaatggacatcca
gcaggcaaaggattctcacaaaaaatggtgaattcagcttatcaaaggtgtttgaatact
ctgcggagagttttctcacaatttgttggagaaataattgaggcaatggctgggtatata
cccctgccagcaattatggcaaagctattatctgacaatggaagtcaagagtttggtgat
tttaaacttgtcatacatagaatgttgtctatgtatctctacgaaaaaagaatactggaa
acagctaagtcagttatcgaggatgattcgttctataccttgagcttattaaagagaggg
gtttgtcatggatttgctccacagacttttgtctgttgtgtatgcaactgctcactttct
aaagaaggtgctatttcagcagttcgagtattcagttgtggacatgcaacacatcttcac
tgtgagtctgaacaaagcaaatcatccaataaggattttaaagatggatgtccagtttgt
ctctcaatgagtgacacacaagcccggaacaaatcacctataatagctgagaatgggcta
tccaagtatcccgtggttgaacatgaagtaccatatggcgtccatcataatcacgagaca
gatcatgttgagagatctcgtgggcttcaccagatgtcacggtttgaaatactgaacaat
ctccagaaaggtcagaagtcttttcatattgagactgtacccccgttgaaactttctccg
ccagccatatatcatgaaaagatacaaaagaaagtaagtttggtgggagaatccagcaga
cagtcagttagaagtgaaaaaccacagaaaatatggcacatgaaggagccaaaatcaaag
aaatcagggaattggcttccaccaaagtcaagcatattcagttctgacaagaatcaagtg
tggtag

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