Triticum dicoccoides (wild emmer wheat): 119320735
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Entry
119320735 CDS
T07278
Name
(RefSeq) probable rhamnogalacturonate lyase C
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
119320735
Enzymes [BR:
tdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
119320735
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
Motif
Other DBs
NCBI-GeneID:
119320735
NCBI-ProteinID:
XP_037450593
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Position
6B:60991845..60995844
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AA seq
708 aa
AA seq
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MAFLLSVIAAASQLLPVARAAAPGTLSAGVKLQEDQHQVVVDNGIVQVAVSKPQGQIIGV
RYVDDTNLLYFNNNEISGGYWDVVWNFPGSGYPTGMNDMLDGTEFRVVSASEEQVELSFM
RTYDPSRLNSVPLNVDKRLVMLRGGSGFYCYAIFEHAGGWPAVDVSEARLVFKLDPTTFN
YMAVSDGIQRFMPGAADRDAPRAVPLAYKEAVLLVHPSETQFAGEVDDKYQYSMDNKDNR
VHGWIAGAGGGGGGGGPVTVGFWVVTPSNEFKSGGPLKRELTSHIGPTSLTMFMGTHYIG
NDMVAKIEAGEHWKKVMGPVFIYLNSNRPERGGFHELWADAKAQAEVEASKWPYSFPESP
DFHKAGERGSVTGRLLVRDRYTSGGEDVPARLAYVGLAARGQPGSWAPESKGYQFWTRAS
ATGGSFAIGNVRAGEYNLYAWVPGVLGDYMRTDPVTVVPGVAIALGDLVFEPPRSGPTLW
EIGVPDRSAAEFFVPDPNPRYLSKLFVARDKYRQYGLWERYAELYPTGDPVFTIGVSNPS
EDWFFAHVTRKSGNGENAPTTRRIRFDLPRVAAGGTYTLRMALAAAHMSKLKVQVNGATG
KGSAGGVFVTPEFGDDNAIARHGEHGRWWSFEFPIDGRLLVQGENTISVTQARAFSVFLG
VMYDYVRLEGPSGWDSGVTSSAGLGKILPLGLLYGLVVLPTLIFLLSK
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcctgctctctgtcattgcggcggcgtcgcagctgttgcccgtggcgcgcgcg
gccgctccagggaccctaagcgccggcgttaagctgcaggaagatcagcaccaggtggtg
gtggacaacggtattgtgcaggtggcggtgtccaagccgcagggccagatcatcggcgtc
cgttatgtcgacgacactaacctcctctacttcaacaacaatgagatatcaggcgggtac
tgggatgtagtttggaactttccaggatcgggatatcccacgggcatgaacgacatgttg
gacggtacagagttcagggtggtatctgcgagtgaggagcaagtggagctctccttcatg
agaacctacgacccatcacgcctcaacagcgtcccgctcaacgtcgacaagaggctggtg
atgctgagaggcggctccgggttctactgctacgccatcttcgagcacgctggcggctgg
ccggccgtcgacgtctccgaggcccggctcgtcttcaagctcgaccccacgacgttcaac
tacatggccgtctcagacgggatccagaggttcatgccaggggcggcggaccgggacgcg
ccccgggccgtgccgctcgcgtacaaggaggccgtgctgctcgtgcacccgtcggagacg
cagtttgctggggaggtggacgacaagtaccagtactcgatggacaacaaggacaaccgc
gtccacggatggatcgccggtgccggtggtggcggcggcggcggcggcccggtgaccgtg
gggttctgggtggtcacccccagcaacgagttcaagagcggcggccccctcaagcgcgag
ctcacctcccacatcggccccacctccttgactatgttcatggggactcattacatcggg
aacgatatggtggcgaagatcgaggccggcgagcactggaagaaggtcatggggccggtg
ttcatctacctcaactccaaccggccagagaggggaggcttccacgagctctgggcggac
gccaaggcgcaggcggaggtcgaggcgagcaaatggccgtacagcttcccggagtcgccg
gacttccacaaggcaggcgagaggggctcggtcaccggtcgcttgctggtcagagacagg
tacacgagcggcggcgaggacgtgcccgcccggctggcctacgtcggcctcgccgctcgg
ggacagcccggctcctgggcgccggagagcaagggttaccagttctggacgagggcgtcg
gcgaccggcggcagcttcgccatcggcaacgtccgggcaggagagtacaacctctacgcc
tgggtccccggggtcctcggcgactacatgcgcacggatccggtaacggtggtgcccggc
gtcgccattgccctcggcgacctcgtgttcgagccgccgcgatcggggccgacgctgtgg
gagatcggcgtgccagaccggagcgccgccgagttcttcgtccctgatcccaaccccagg
tacctcagcaagctcttcgtcgccagggacaagtacaggcagtacgggctgtgggagcgg
tacgccgagctgtaccccacgggcgaccccgtcttcaccataggcgtgagcaacccctcc
gaagactggttcttcgcgcatgtcacaaggaagagtggcaacggcgagaacgcgccgacg
acgcggcggatccggttcgacctgccccgcgtcgccgccggtggcacctacacgctgcgc
atggccctcgcggcggcgcacatgtccaagctgaaggtgcaggtgaacggggcgacgggg
aaggggtcggccgggggagtgttcgtgacgcccgagttcggcgacgacaacgcgatcgcg
cggcacggcgagcacggcaggtggtggagcttcgagttcccgatcgatgggcgcctgctc
gtgcaaggggagaacaccatcagcgtcacgcaggcgagggcgttcagcgtgttcctgggg
gtcatgtacgattacgtccggctggaagggccgtccggttgggattctggagtcacaagt
agtgctggtctaggcaaaatcttgcctctcggtttgctatatgggcttgtcgtgctacca
acattgatatttctgctaagcaagtga
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