Triticum dicoccoides (wild emmer wheat): 119320929
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Entry
119320929 CDS
T07278
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
119320929
Enzymes [BR:
tdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
119320929
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
CarbopepD_reg_2
RhgB_N
Motif
Other DBs
NCBI-GeneID:
119320929
NCBI-ProteinID:
XP_037450728
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Position
6B:complement(147690091..147692764)
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AA seq
670 aa
AA seq
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MATTARLILLAVAVSLVLQVATAVSAAPSSGPRGGVTLRVDSRQVVVDNGLVQVSLSRPG
GHITGVRYGGDRTNLLHSTRSRNTGGYWDMVWNIPGSDQRGLLNSLDGSEFRVVTQSDDK
VELSFRSTYSPGRRNDVRLNFDKRLVMLKGSSGFYSYAILEHGADTPAIDISLARLAFKL
NTDRFNYMAVSDDVQRYMPRAADRDAPRSSPLAYKEAVLLVDPAEPEFKGEVDDKYQYTL
DTKDNKVHGWVSTSSGQPSHVGFWVVTPSSEFKSGGPLKRDLTSHVGPTCLSVFHGSHYV
GDDIVARIGDGEQWKKVMGPVFVYLNSNSEKGDPRALWEDAKSTAQAEAAKWPYSFPESP
DFHKAGERGSVTGRLLVRDRYVSRDNMPARAAYVGLAAPGQPGSWATESKGYQFWTTASN
TSGEFTIDNVRAGEYNLYAWVPGVLGDYMNTTRVTVTPGGAINLGDLVYEAPRSGPTLWE
IGVPDRSAKEMFVPDPDPKYLNKLFQNKDRYRQYGLWERYAQLYPTDDLVYTVGESHHSK
DWYFAHVTRKVGDDIVPTTRQIRFRLDRVVPSGSYTLRVALAAAHAARLQVQVNGATRRG
GGVFGTPAFGDGNAIARHGDHGTQWSFEFPISGRLLRQGDNTIHITQTRANSIFLGVMYD
YLRFEGPPGS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgacggcgcgcttgatcctgctcgccgtcgccgtgtcgttggtgctgcaggtc
gccaccgccgtgtcggcggcgccatcgtcgggaccccgcggcggtgttacgctgcgcgta
gatagtagacaggtggtggtggacaacgggttggtgcaggtgtcgctgtcgaggcccggg
ggccacatcaccggcgtccgctacggcggggatcggacgaacctgctgcactccaccagg
agcagaaacactggcgggtactgggatatggtgtggaacatccccggctccgatcaacga
ggcttgctcaattcactggatggctcggagttcagggtggtaacgcagagcgacgacaag
gtggagctgtcgttccggagcacgtacagcccgggacgtcggaacgacgtccggctcaac
ttcgacaagaggctggtgatgctcaagggcagctccgggttctacagctacgccatcctg
gagcacggcgcggacacgccggccatcgacatcagcctggcccggctcgccttcaagctc
aacacggacaggttcaactacatggccgtctcggacgacgtccagcggtacatgccgcgg
gcggccgaccgggacgcgccccgcagctccccgctggcgtacaaggaggcggtgctgctg
gtcgacccggcggagccggagttcaagggggaggtggacgacaagtaccagtacacgctg
gacaccaaggacaacaaggtgcacgggtgggtcagcactagcagcggccagccgagccac
gtcggcttctgggtcgtcacccccagcagcgagttcaagagcggcgggccactcaagcgc
gaccttacctcgcatgtcggcccgacgtgcctgagcgtgttccatgggtcgcactacgtc
ggggacgacatcgtggcgcgcatcggggacggcgagcagtggaagaaggtcatgggtccc
gtgttcgtctacctcaactctaactcggagaagggagacccgcgggcgctctgggaggac
gccaagtcgacggcccaggccgaggctgccaagtggccctacagcttcccggagtcgccg
gacttccacaaggccggggagagaggctccgtcaccggccgattgctcgtaagggacagg
tacgtgagcagggacaacatgcccgctcgggcagcttacgttggcctggccgcgcccggg
cagcctggctcgtgggcgacggagagcaagggctaccagttctggacgacggcgtcgaac
acttcgggcgagttcaccattgacaacgtccgggcaggggagtacaacctctacgcgtgg
gttcctggggttctcggcgattacatgaacaccacccgcgtcaccgtaacacccggcggc
gcaatcaacctcggcgatcttgtgtacgaggctccgagatcagggccgacgctgtgggag
atcggcgttcctgaccggagcgcgaaggagatgttcgtccccgaccccgacccgaagtac
ctcaacaagctcttccagaacaaagacaggtacaggcagtacgggctgtgggagaggtac
gcccaactgtacccgacggacgatctcgtctacaccgtcggcgaaagccaccactccaag
gactggtacttcgcacatgtcacaagaaaggtcggcgacgacatcgtaccgacgacgagg
cagatccggttccgcctggaccgcgtcgtgcccagcggcagctacacgttgcgcgtcgcc
ctcgcggccgctcatgcggcgaggctgcaggtccaggtgaacggggcgacgaggcgtggg
ggcggcgtcttcgggacgccggcgttcggggacggcaacgcgattgcgaggcacggcgac
cacggcacgcagtggagcttcgagttcccgatcagcgggaggctgctccggcaaggggac
aacaccatccatatcacacagacgagggcgaacagcatattcttaggggtcatgtacgac
tacttacggttcgaagggcctcccggttcttga
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