Triticum dicoccoides (wild emmer wheat): 119320930
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Entry
119320930 CDS
T07278
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
119320930
Enzymes [BR:
tdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
119320930
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
CarbopepD_reg_2
RhgB_N
Av_adeno_fibre
Motif
Other DBs
NCBI-GeneID:
119320930
NCBI-ProteinID:
XP_037450729
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All DBs
Position
6B:148062232..148064866
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AA seq
670 aa
AA seq
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MATTARLILLAVAVSLMLHVAAVSAAPPSGSRGGVTLRVDSRQVVVDNGLVQVSLSRPGG
HITGVRYGGEGSNLLHSSRSRNTGGYWDMVWDIPGSDQRDLLNSLDGSEFRVVTQSDDQV
ELSFRSTYSPERRNGVRLNVDKRLVMLKGSSGFYSYAILEHGADTPAIDITQARLAFKLN
TDRFNYMAVSDDVQRYMPRAADRDAPRSSPLAYKEAVLLVDPSEPQFKGEVDDKYQYTLD
TKDNRVHGWVSTSSGQPSHVGFWVVTPSSEFKSGGPLKRDLTSHVGPTCISMFHGRHYIG
DDIVARIGDGEQWKKVMGPVFVYLNSNSEKGDPRVLWEDAKATAQAEAAKWPYSFPESPD
FHKAGERGSVTGRLLVRDRYVSRDNMPARAAYVGLAAPGQPGSWATESKGYQFWTTASNT
SGEFTIDNVRAGEYNLYAWVPGVLGDYMNTTRVTVTPGGAINLGDLVYEAPRSGPTLWEI
GVPDRSAKEMFVPDPDPKYLNKLFQNNDRYRQYGLWERYAQLYPTDDLVYTVGESHHSKD
WYFAHVTRKAGDDIVPTTRQIRFRMGRVVPGGTYTLRVALAAAHAARLQVQVNGGTRRGG
GVFGTPAFGDGNAIARHGDHGTQWSFEFPISGRLLRQGDNTIHITQTRANSIFLGVMYDY
IRFEGPPGSS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgacggcgcgcttgatcctgctcgccgtcgccgtgtcgttgatgctgcatgtc
gccgccgtgtcggcggcgccaccgtcgggatcccgcggcggcgttacgctgcgcgtggat
agtagacaggtggtggtggacaacgggttggtgcaggtgtcgctgtcgaggcccgggggc
cacatcaccggcgtccgctacggcggggaagggtcgaacctgctgcactccagcaggagc
agaaacactggcgggtactgggatatggtgtgggacatccccggctccgatcaacgcgac
ttgctcaactcgcttgatggttcggagttcagggtggtaacgcagagcgacgaccaggtg
gagctgtcgttccggagcacgtacagcccggaacgtcggaacggcgtccggctcaacgtc
gacaagaggctagtgatgctcaagggcagctccgggttctacagctacgccatcctggag
cacggcgcggacacgccggccatcgacatcacccaggcccggctcgccttcaagctcaac
acggacaggttcaactacatggccgtctcggacgacgtacagcgctacatgccgcgggcg
gctgaccgggacgcgccccgcagctccccgctggcgtacaaggaggcggtgctgctggtc
gacccgtcggagccacagttcaagggggaggtggacgacaagtaccagtacacgctggac
accaaggacaacagggtgcacgggtgggtcagcactagcagcggccagccgagccacgtc
ggcttctgggtcgtcacccccagcagcgagttcaagagcggcgggccgctcaagcgagac
ctcacctcgcatgtcggcccgacgtgcatcagcatgttccatgggaggcactatatcggg
gacgacattgtggcgcgcatcggggacggcgagcagtggaagaaggtcatgggccccgtt
ttcgtctacctcaactctaactcggagaagggagacccgcgggtgctctgggaggacgct
aaggcgacggcccaggccgaggcggccaagtggccctacagcttcccggagtcgcctgac
ttccacaaggccggcgagagaggctctgtcaccggccgattgctcgtaagggacaggtac
gtgagcagggacaacatgcccgctcgggcagcttacgttggcctggccgcgccaggtcag
cctggctcgtgggcgacggagagcaagggctaccagttctggacgacggcgtcgaacact
tccggcgagttcaccattgacaacgtccgggcaggggagtacaacctctacgcgtgggtt
cctggagttctcggcgattacatgaacaccacccgcgtcaccgtaacacccggcggcgca
atcaacctcggcgatcttgtgtacgaggccccgagatcggggccgacgctgtgggagatc
ggcgttccggaccggagcgccaaggagatgttcgtccccgaccccgacccgaagtacctc
aacaagctcttccagaacaatgacaggtacaggcagtacgggctgtgggagaggtacgcc
caactgtacccgacggacgatctcgtctacaccgtcggcgaaagccaccactccaaggac
tggtacttcgcacatgtcacaagaaaggccggcgacgacatcgtgccgacgacgcggcag
atccggttccgcatgggccgcgtcgtgcccggcggcacctacaccttgcgcgtcgccctc
gcggccgctcacgcggcgaggctgcaggtccaggtgaacggggggacgaggcgtgggggc
ggcgtcttcgggacgccggcgttcggagacggcaacgcgattgcgaggcacggcgaccac
ggcacgcagtggagcttcgagtttccgatcagcgggagactgctccggcaaggggacaac
accatccacatcacgcagacgagggcgaacagcatattcttaggggtcatgtacgactac
atacggtttgaaggaccgcccggctcttcctag
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