Triticum dicoccoides (wild emmer wheat): 119321042
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Entry
119321042 CDS
T07278
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119321042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119321042
03012 Translation factors [BR:
tdc03012
]
119321042
Enzymes [BR:
tdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119321042
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
119321042
Translation factors [BR:
tdc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
119321042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
BEX
AAA_19
ABC_tran
NACHT
SR-25
Motif
Other DBs
NCBI-GeneID:
119321042
NCBI-ProteinID:
XP_037450791
LinkDB
All DBs
Position
1B:complement(88386462..88399652)
Genome browser
AA seq
1031 aa
AA seq
DB search
MLLHTSGCRGSLLFRSGFPFPATTTRRNLRALTTAAATPNMYRGGRGGGGGTNSQRGRGR
GRGGGGRGGRGGGGGGRGEQRWWDPQWRAERLRQMAGEVEKVDEHEWWNTIGQLREGSQQ
ELVVKKNFGRDGQNTLADIAQRHGLYFNAYNKGKTLVFSKVPLPDYRADLDERHGSSQNE
IKMSNETERRVENLLSRAQSNNNASASTSTVSMRQSLPSTSTSIAESTTYVDKQKLSFQL
RDMQRSKKMMPSARSMQSFREKLPAFKAREEFLKAVAANQVLVISGETGCGKTTQLPQFI
LEEEIDNLRGADCSIICTQPRRISAISVAARVGSERGEELGETVGYQIRLESKRSTQTRL
LFCTTGVLLRKLVQEPDLVGVSHLLVDEIHERGMSEDFLIIILRDLLPRRPDLRLVLMSA
TINAELFSKYFGDAPIMHIPGFTFPVAELFLEDILEKTQYKIKSERDNFQGNSRKKRLAS
VKNDPLADIFEDVDISKEYGNYSITTRQSLEAWSVTELDLSLVEGTIEYICRHEGEGAIL
VFLTGWDEISKLLDKIKGNNLLGNSNKFLVLPLHGSMPTVNQREIFDRAPANMRKIVLAT
NIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVC
YRLYPKVIHAAMPQFQLPEILRTPLQELCLTIKSLQLGAVASFLAKSLQPPDPLSVKNAI
ELLKTIGALDDLEELTYLGRHLCTLPLDPNIGKMLLIGSVFQCLDPALTIAAALAYRNPF
VLPIDRKEEADAVKRSFAGDSCSDHIALLKAFEAWKEAKRSGRERSFCWENFLSPMTLKM
MDGMRNQFFDLLSDIGFVSKTRGVKAYNHYGKDLEMVSAVLCAGLYPNVIQCKRRGKRTA
FYTKDVGKVDIHPSSVNAGVQQFPLPYLVYSEKVKTASIYVRDSTNISDYALLLFGGSLR
PSNTGEGIEMLGGYLHFSAPKRIIELIQRLRGELDKLLQRKIEEPALDIFSEGKGVVAAA
IELLHSQNIYH
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgctcctccacacttccggttgccgcggcagtctcctgttccgcagcggcttccccttc
ccggccaccaccacccgcagaaacctaagggcgctcacaaccgcagcagctactcccaac
atgtatcgcggcgggcgcggcggcggcggcggcaccaactcccagcgtggtcgcgggcgc
gggcgcggcggcggaggcagaggaggccgtggcggcggcggcgggggccgtggtgagcag
agatggtgggatcctcagtggcgcgccgagcggctgcggcagatggccggagaggtggaa
aaggtcgatgagcatgagtggtggaatacgattgggcaattaagagaaggatctcagcag
gagttagtagtcaagaagaatttcggacgtgatggacagaatacacttgcagatattgct
cagagacacggcctttacttcaatgcatacaacaaagggaagacacttgttttcagcaaa
gtgccactgcctgattaccgagcagatcttgatgagaggcatggatcatcacaaaacgag
attaagatgtccaatgagacagagagacgagtggaaaaccttttgtccagggcacagtca
aataacaatgcttctgctagcacatccactgtctcaatgaggcaatctttgcccagcaca
tccacatcaatagctgaatcaacaacatatgttgataaacagaagctaagttttcagctt
agggatatgcagagatcaaaaaagatgatgccaagtgctagatcaatgcagtctttcagg
gaaaaattaccagcattcaaagcgagagaggagtttttgaaagcagtagcagctaatcag
gttttggtcatatctggtgagacaggttgtggtaaaacaacacagcttccgcagttcata
ctagaagaggagatagataaccttcgtggtgctgattgcagcataatatgtactcaaccc
cgccgtatatctgccatatcggttgcagcacgtgtaggatctgagagaggtgaagagctt
ggtgagactgttggataccagattcgccttgaatcaaaacgttccacacaaacacgactg
ctcttctgcacgacaggagttttgcttcgaaaactggttcaggagccagacttagttggt
gtaagtcatttactagttgatgaaattcatgaacgtggcatgagtgaagattttctcatc
atcattttacgggaccttctgccaaggcgtcctgaccttcgccttgtattgatgagtgca
acaataaatgctgaactattttccaaatactttggagatgccccaattatgcatattccg
gggttcacttttcctgttgctgagttatttctggaagatattttggaaaagacccaatac
aaaatcaagtctgaacgtgataattttcaaggaaattcaagaaaaaagagacttgcttca
gttaagaatgatccattggctgatattttcgaggacgtcgacattagtaaggaatatgga
aactacagcattacaacaaggcaatcccttgaagcttggtctgtcactgaactggatttg
agccttgtggaaggtacgattgagtatatctgtcgtcatgaaggagaaggtgcaatcctt
gtattccttactggttgggacgaaatttcaaaacttttggacaagattaaagggaataat
ctgcttggcaattccaataaattcctagttctcccactgcatggctctatgccaactgtt
aatcagcgtgaaatttttgacagagcaccagctaatatgagaaaaattgttctggcgaca
aatattgcagaaagcagtattacaatagatgatgttgtgtatgtaattgattgtggtaaa
gcgaaggagacaagttatgatgccttgaataagctagcgtgccttctaccatcgtggata
tcaaaagcctctgctcatcagaggcgaggccgtgcaggccgtgttcagccaggtgtttgc
tataggttgtacccgaaagtcattcatgctgccatgcctcagtttcagctgcctgaaatt
cttaggacgcctctgcaagaactgtgccttactatcaaaagcttacagcttggagcagtt
gcttctttcttagccaagtcactgcaacccccagatccgctctctgttaagaatgcaatt
gagcttctgaaaaccattggagcgctggatgatttggaggagctcacttatttaggacga
catctatgtacactaccactggatccaaacattggaaagatgctgctcattggatccgtc
ttccagtgcctggatcctgcattaacaattgctgctgctcttgcttatcgtaatccattt
gtgctcccaattgatagaaaagaagaagcagatgctgtcaaaagatcatttgctggtgac
tcctgcagtgatcatattgcccttcttaaggcatttgaagcatggaaggaagcaaaacgc
agtggaagggagcgttccttctgttgggaaaattttctgtctcctatgaccctgaagatg
atggatggcatgcgaaatcaattttttgatctactttctgatattggatttgttagtaag
acaagaggagtgaaggcatataaccattatggcaaggatctggagatggtttctgctgtt
ttatgtgctgggctttacccaaatgtcatacagtgcaaaagacggggcaagaggacagca
ttctacaccaaagatgtcggaaaggtggacattcacccatcatcagtcaatgcaggagtg
cagcaattcccattgccttatctggtttacagtgagaaggtgaaaactgctagcatttat
gtgagggactccacaaacatatcagattatgctcttctactttttggtggttccttaaga
ccaagtaacaccggagaaggcatcgagatgcttggggggtatcttcatttctctgcacca
aagcgtatcatagagttgatccagagattaagaggtgaattggacaaactccttcagagg
aagattgaggaacctgcacttgacatcttttcggaagggaaaggggttgtggctgcggcc
atagaactgttgcacagtcaaaacatttaccactag
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