Triticum dicoccoides (wild emmer wheat): 119322032
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Entry
119322032 CDS
T07278
Name
(RefSeq) SWI/SNF complex subunit SWI3B-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119322032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdc03021
]
119322032
03036 Chromosome and associated proteins [BR:
tdc03036
]
119322032
Transcription machinery [BR:
tdc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119322032
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119322032
PBAF complex
119322032
GBAF(ncBAF) complex
119322032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
DUF3079
Motif
Other DBs
NCBI-GeneID:
119322032
NCBI-ProteinID:
XP_037451436
LinkDB
All DBs
Position
6B:complement(241536192..241541471)
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AA seq
493 aa
AA seq
DB search
MATPPAPVPPATANSAPTPTQSPFKAPPFSQPPSTAGTLKTEIPPASTSAATAAGVAAVG
ASAEDSSHVITVPSYSGWFSYDSISDTERRLLPEFFEGEVAAVSGSRGPEAYKYYRNTLV
KRFRARPARRLTLTEARRGLIGDVGSVRRVFDFLEEWGLINHGAPPLGAKQGKDKREEAT
TSQSSLPAGPTTPKKLCVGCRSVCGSAYFTCDKADISICCRCFVRGNYRPGLTPADFKKV
EISEDAKSDWTDKETLHLLEAVLHYGEDWKKVSEHVGSRSEKDCIARLIRLSFGEQFMGS
KEQKMEFEIDDDVTNESRAEIPKRLRLTPLADASNPIMAQVAFLSAIVGSGVAAAAAQAA
ISAQSQVDMNDSQTDSPISSTKEEESSYTNGLSANDLLKEASTNAQVQLQKEQKDIEQSL
SAIVDVQMKEIQDKISRFEQKELLMEKEREQLHHLRELLFVDQLAVVQHQRRPHAVAAEN
KEEEKPKPIITMS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggccacaccgccggctccggtgcccccggccaccgccaactccgcgccgacgcctacg
cagtcaccgttcaaggccccacccttctcccagcccccgtccactgccggtaccctaaag
acggagatccctcccgcctccacctccgccgccaccgccgccggagtcgccgccgtggga
gcctcagccgaggactcatcgcacgtcatcaccgtccctagctactcagggtggttctcc
tacgacagcatcagcgacacggagcgccgcctgttgccggagttcttcgaaggggaggtc
gcggccgtgtctgggtcccggggcccggaggcctacaagtactaccgcaacaccctcgtc
aagaggttccgggcaaggccagcgcggcggctcacgctcaccgaggccaggcgaggcctt
atcggcgacgttggctctgtgcgccgtgtgtttgacttcctggaggaatgggggctcatc
aaccatggtgctcctccgctgggggcgaagcaggggaaagacaagagggaggaggcgacg
acttctcagtcttcattgcctgccggaccaaccacacccaagaagctctgtgtagggtgc
cggagcgtctgcggctctgcatatttcacctgcgataaggcggatataagcatatgttgt
agatgctttgtgcgtggcaactatcggcctggtcttactccagcggacttcaagaaagtt
gaaattagcgaagacgccaaatcagattggacagacaaggaaactcttcacctacttgag
gctgtcttgcattatggagaagactggaagaaggtttcggagcatgttggtagtcgctca
gagaaagactgcattgctagactcatccgattatcttttggagaacagttcatgggatcc
aaggagcagaaaatggagtttgagattgatgatgatgttactaatgaatctagagcagag
atcccaaaacgactccgtctcacaccactggcagatgcaagcaatccaattatggctcag
gtcgcgttcttgtcggcaattgttggctcaggtgttgcggcggcagcagcgcaagcagct
atttctgcacaatcccaggttgatatgaatgacagccagactgattctccaatcagcagc
actaaagaagaagaatcttcttacactaatgggctttcagccaacgatttactcaaagag
gcatccacaaatgcacaagtgcaacttcaaaaggagcaaaaagatatagagcaatcttta
tcggccatagtggacgtccagatgaaggaaatccaggataagataagccgttttgagcag
aaagagctgcttatggagaaagagagggagcagctccatcacttacgggaactgcttttt
gtggatcagctcgcggttgtgcagcatcagcgcagaccgcatgctgtagcggctgagaac
aaggaggaggagaaaccgaaacctattatcaccatgagttaa
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