Triticum dicoccoides (wild emmer wheat): 119322156
Help
Entry
119322156 CDS
T07278
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase nop2-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tdc03009
]
119322156
Enzymes [BR:
tdc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
119322156
Ribosome biogenesis [BR:
tdc03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
119322156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-GeneID:
119322156
NCBI-ProteinID:
XP_037451545
LinkDB
All DBs
Position
6B:563258177..563263878
Genome browser
AA seq
764 aa
AA seq
DB search
MARKVAQRRPAAPPAPPAAKKVVKVPSRTAKRAAPKKQKLPEPSSDDDSEAEQQPLHEEE
EEDSDVEAPSDSDAEELSGSDAGSSEEEEDEEEEEDDDPLAGDFLAGSDDGSDEGGDSGE
ESDGSDDLVAKSEALDRQKEQAEEDAAADLALNIRSESDEFRLPTKEELEEEALGPPNLP
NLKRRISEIVRVLSNFSKLRQENVARKDYVDQFKTDVMAYYGYNEFLIEAFVEMFPAVEV
VELLESFEKRPPECLRTNTLKTRRRDLAAALIPRGFNLDPIGKWSKVGLVVYDSTVSSGA
TVEYMAGHYMKQGASSFLPVMALAPQEKERIVDMAAAPGGKTTYIGALMKNTGIIYANEL
NEKRLHGLLGNIHRLGVTNTIVCNYDGKELPKVLGMNSVDRVLLDAPCTGTGTVWKDAQI
KTSKDIDDIRNCAFVQKQLLLAAIDLVDANSKTGGYIVYSTCSMMIPENEAVIDYALKKR
DVKVVPCGLDFGRPGFIRFREHRFHTSLDKTRRFYPHVNNMDGFFVAKLKKLSNTIPASS
ESSKEPEEAVEGVVDPNHDEEDEKDVPDGQSTKSKNHKQGKKKNEQASIPEGGEGDQSQA
PERPAKHLKSNKGVKKSSGPKSAEMNGDKKETRDEQTEHVKSQKGSKKSKGPKNAEMDVD
EKETPSEQTEDVKSHKGAKRSNGPKRAGINGEKKDVAEEQTEQTSHKKKDVSDKIKKSGS
KSTSGTKEKKPVSKEGSKKRKRKWQFKLRRDWEAKQKSEKRTKV
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggccaggaaggtcgcgcagcgcaggccggcggcgcctcccgcgccgcccgcggcgaag
aaggtggtcaaggtcccctcgaggacggccaagagggcggctccgaagaagcagaagctt
cccgagccctcctccgacgacgactccgaggcggagcagcagccgctccacgaggaggag
gaggaggattcagacgtcgaggccccctccgactccgacgccgaggagctctctggctcg
gacgccggtagcagcgaggaagaggaggacgaggaagaggaggaagacgacgaccccctc
gccggcgacttccttgccggcagtgacgacggcagtgacgaggggggcgactctggagag
gaatcagatgggtctgatgacttagtggcaaagtcagaagctcttgatcgacagaaggag
caggctgaagaagatgcagctgcggaccttgcactcaacataagatcagaatctgatgaa
ttccggttgcccaccaaggaggagctggaagaagaggcacttggtccacctaacctgcca
aatcttaaaaggaggatctcagaaattgtacgggtactctcaaactttagcaagctgagg
caagaaaatgttgccagaaaagattatgtcgatcagttcaagacggacgtgatggcatac
tatggatacaatgaatttctcattgaagcatttgttgagatgttcccagctgttgaggtt
gtcgagctacttgaatcatttgaaaaaagaccccctgagtgcttgcgtacaaatacacta
aagacccgtaggagggatcttgctgctgctcttattcctagagggtttaatctggatccg
attggaaaatggtcaaaggtaggattagttgtatacgactccactgtttcgtctggcgcc
actgttgaatatatggcaggacattacatgaaacaaggcgcaagttcctttttgccagtg
atggctcttgctccgcaggaaaaggagcgaatagttgatatggcagctgccccaggtggc
aagaccacatacattggagctctgatgaaaaatactggaataatctatgcaaatgagctt
aacgagaaaaggttgcatggactgttgggcaacatacatcgcctgggtgtgacaaatacc
atagtttgtaattatgacggtaaagagctccccaaagtacttggaatgaactcagttgac
agagtactgttggatgcaccctgcacaggcaccggaaccgtttggaaagatgcacaaata
aaaacatctaaggacatcgatgacatcaggaattgtgctttcgtacaaaagcaattgctt
ctggctgctattgatttggttgacgccaactccaaaactggtggttacattgtttactct
acttgttcgatgatgattccagaaaatgaagcagtcatcgactatgcccttaaaaagaga
gatgtaaaggttgttccttgtggattagattttggacgcccaggattcatccggttccgg
gagcatcgcttccatacgtctttagacaaaacaaggaggttttatcctcatgtcaacaac
atggatggctttttcgtagctaagctgaagaagttgagcaacacaattccagcctcgtcc
gagtcatctaaagagcccgaagaagcagtggagggcgttgttgatccaaaccatgatgag
gaagatgagaaagatgttcctgatgggcaatccactaaatcgaagaatcataaacaggga
aagaagaaaaatgaacaagcaagcatccctgaagggggggagggggaccagagtcaggca
cctgaaagaccagcaaagcacctcaagagcaacaaaggcgtgaagaaaagtagtggccct
aaaagtgctgaaatgaacggagataagaaagaaacacgcgatgaacaaacagagcatgtc
aagagtcagaagggttccaagaaaagtaaaggccctaaaaatgctgaaatggatgtagat
gagaaagaaacacccagtgagcaaacagaggatgtcaaaagccacaagggtgcgaagaga
agtaatggacctaaaagggctggaataaatggagagaagaaagatgtggccgaggaacaa
acagagcagaccagccacaaaaagaaggatgtgtctgataaaattaagaagtctggttcc
aagagcacctcagggaccaaagagaagaaaccggtgtccaaggaaggaagcaagaagagg
aaaaggaaatggcaattcaagctgaggcgggactgggaggcaaaacagaagtccgagaag
aggacgaaggtatga
DBGET
integrated database retrieval system
