Triticum dicoccoides (wild emmer wheat): 119322400
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Entry
119322400 CDS
T07278
Name
(RefSeq) spliceosome-associated protein 130 A-like
KO
K12830
splicing factor 3B subunit 3
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119322400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdc03021
]
119322400
03041 Spliceosome [BR:
tdc03041
]
119322400
03036 Chromosome and associated proteins [BR:
tdc03036
]
119322400
Transcription machinery [BR:
tdc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
119322400
Spliceosome [BR:
tdc03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
119322400
Complex B
119322400
Complex C
U2 SnRNP specific factors
119322400
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
119322400
TFTC complex
119322400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
119322400
NCBI-ProteinID:
XP_037451796
LinkDB
All DBs
Position
6B:complement(145593369..145598778)
Genome browser
AA seq
1227 aa
AA seq
DB search
MYLYSLTLQRATGAVCAVIGSFSGRDSKKSNAAGSSTQEIAVARGGTLDLLRPDPETGRL
RTLLSVDVFGAIRSLAQFRLTGATKDYLVVGSDSGRLVILEYSPDRNRFDKVHQETFGKS
GCRRIVPGQLLSVDPKGRALCIAALEKQKLVYVLNRDASARLTISSPLEAHKSHTLTFAL
TALDCGFDNPVFGAIELEYGDSDRDPTGQAASHAQKLLTFYELDLGLNHVSRKVSEPVDN
GANMLVTVPGGADGPSGLLVCCDNFVLYRNQGHPEVRAVIPRRVDLPAERGVLIVAAATH
RQKSLFFFLLQTEYGDIFKVDLDHHGDTVSELRIKYFDTIPVASAICVLRSGFLFAASEF
GNHALYQFRDIGRDVDVESSSATLMETEEGFQPVFFQPRALKNLVRIDEIESLMPIMDMR
IANLFDEETPQVYTACGRGSRSTLRILRPGLAISEMARSMLPAEPIAVWTVKKNINDMFD
AYIVVSFANVTLVLSIGETIEEVSDSQFLDTTHSLAVSLLGEDSLMQVHPNGIRHIREDG
RVNEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQLMEVEKQDMSGDVACLAI
APVPEGRQRSRFLAVGSYDNTIRILSLDPDDCLQPLSVQSVSSAPESLLFLEVQASVGGE
DGADYPANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLFPCIVSHRQAMLC
LSSRPWLGYIHQGHFLLTPLSCDTLESAASFSSDQCSEGVVAVAGDALRIFTIERLGETF
NETSIPLRYTPRKFVILPKKKYLAVIESDKGAFSAEQREAAKKECLEAAGAAENGNGNGD
QMENGDGQEDGEESNTLPDEQYGYPKAESEKWVSCIRILDPRSTDTTCLLELQDNEAAVS
ICTVNFHDKEHGTLLAVGTTKGLQFWPKRSLASGFIHIYKFVNEGKSLELLHKTQVEEVP
LSLCQFQGRLLAGVGSVLRLYDLGKRKLLRKCENKLFPRTIVSIHTYRDRIYVGDMQESF
HYCKYRRDENQLYIFADDSVPRWLTAANHIDFDTMAGADKFGNIYFARLPQDLSDEIEED
PTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVTCLQKASLIPGGGECLIYGTVMGSVGAL
LAFTSREDVDFFSHLEMHLRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQYPALPADM
QRKIADELDRTPGEILKKLEDIRNKII
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgtacctctacagcctgacgctgcagcgggcgacgggcgccgtgtgcgccgtcatcggc
agcttcagcggccgcgactcgaagaagtcgaacgccgcgggctcctccacgcaggagatc
gccgtcgcccgcggcggcacgctcgatctcctccgcccggacccggagacgggccgcctc
cgcacgctcctctccgtcgacgtcttcggcgccatccgctcgctcgcccagttccgcctc
acgggggccaccaaggactacctcgtcgtcggctccgactccggccgcctcgtcatcctc
gagtactcccccgaccgcaaccgcttcgacaaggtccaccaggagaccttcggcaagtcc
ggctgccgccgcatcgtgcccggccagctcctctccgtcgaccccaagggccgggcgctc
tgcatcgccgccctcgagaagcagaagctcgtctacgtcctcaaccgcgacgcctccgcc
cgcctcaccatctcctccccgctagaggcgcacaagtcccacacgctcaccttcgccctc
acggccctcgactgcggatttgacaaccctgtctttggtgccatcgagctcgagtacggt
gactctgaccgtgaccccacagggcaggctgctagccacgcgcagaagctcctcaccttc
tacgagctcgacctggggctcaatcatgtttcccgcaaggtctccgagccggttgacaat
ggtgctaatatgctagtgacagtgcctggtggtgctgatggccctagcgggcttcttgtt
tgctgtgacaactttgtcctgtaccggaatcagggccacccggaggttcgtgctgtcatt
ccacgccgtgttgacctcccggctgagcgtggcgtcctcatagttgctgctgccacgcac
aggcagaagagcttgttcttcttcttactacagactgagtatggtgatatcttcaaggtt
gacctggaccaccatggtgatactgttagtgagctcaggatcaaatattttgacaccata
cctgtggcatctgctatctgtgtgctgcggtcaggcttcctctttgctgcttctgagttt
ggcaaccatgcactttaccaattccgtgatattggccgggatgtggatgttgagtcctcc
tctgcgacactgatggagacagaggaggggttccagccagtgttctttcagccgagggca
ctcaagaaccttgtccggattgatgagatagagagcctcatgccaatcatggacatgcgt
attgcaaatttattcgacgaggaaacaccccaggtgtacacagcttgtggccgtggctca
cgctccacgctgcgcatccttaggcctggccttgccatcagcgagatggcccgatcaatg
ctgcctgctgagcccattgctgtttggactgtcaagaagaatatcaatgacatgtttgac
gcctacattgttgtgtcctttgctaatgtcacacttgtgctctcaattggagagaccatt
gaagaagtcagcgacagccagttcctggacaccactcactcactagcagtttcgctcctt
ggtgaggattctctcatgcaggtccacccgaacggtatcaggcatatcagggaggatggc
cgtgtcaatgagtggaggacgcctgggaagaaaactatcaccaaggttggatcaaaccgg
ctccaggtggtaattgccctcagtggtggagagctcatctattttgagatggatatgaca
ggtcagctcatggaggtggagaagcaggacatgtctggtgatgtcgcgtgcctggccatt
gcccccgttcctgaagggaggcaaaggtcccgttttctcgcagttggctcctatgataac
accatcaggatactctcccttgaccccgatgactgcttgcagcctcttagtgtacaaagt
gtgtcctcggctccggaatctctcttgttcttagaagtacaggcatcagttggtggcgag
gatggtgcagattatccagccaaccttttccttaatgctggtttgcagaatggtgtcctt
ttccgaaccaatgttgacatggtcactggtcagctatcagacacacggtctcgattcctt
ggtctgagacctccaaagctgtttccctgcatagttagccaccgacaagcaatgctttgc
ctgtccagccgcccctggcttggctatatacatcaaggtcacttcctcttgacaccactc
tcatgcgacacacttgagtctgctgcgtcgttctcttctgaccagtgctcagaaggtgtt
gttgctgttgctggagacgctctgcgtattttcaccatcgaacgtctgggagagacattc
aatgagacatctatccctctgcgttacaccccgaggaaatttgtgatactaccaaaaaag
aaataccttgcagtcattgagagtgacaagggtgcatttagcgcagaacagcgagaagct
gctaagaaggagtgccttgaggctgctggtgcggcagaaaatggaaatggtaatggggat
caaatggagaatggtgatggtcaagaagatggtgaggagagtaacacacttcctgatgaa
caatatggttacccaaaggcagaatcagaaaagtgggtttcctgcattagaattcttgat
ccgaggagcacggacacaacttgtcttctggaattgcaggacaatgaggcggctgtcagt
atttgcactgtgaatttccatgataaggagcatggtactcttctggctgttggtactacc
aagggattgcagttctggccaaagaggagccttgcttctggtttcatccacatatacaag
tttgtcaatgaagggaagtcgcttgaacttcttcacaaaacacaagtggaggaagtgcct
ctttctttgtgccagtttcagggtcggttgcttgcaggtgttggttcagtgctgaggtta
tatgatctggggaagagaaagttgctcagaaaatgtgaaaacaagcttttcccaaggaca
atagtgtctattcatacttaccgtgataggatctatgttggtgatatgcaagagtcgttt
cattattgcaagtacagacgggacgaaaaccagctgtatatctttgctgatgacagtgtt
cctagatggcttacagcagcaaatcacatagatttcgacactatggcaggagccgacaag
tttgggaacatatattttgctcgtcttccccaggatctctcagatgaaattgaggaagac
ccaactggaggcaagattaaatgggagcaagggaagttaaatggtgctccaaacaaagtg
gaggagattgtgcagtttcatgttggtgatgttgtgacatgtttgcagaaggcttctttg
atacctggcggaggtgaatgtcttatttatgggactgtgatgggtagtgttggagcactg
cttgcattcacctccagggaagatgttgacttcttctctcatttggagatgcatctccgc
caggagcatccaccattatgtggaagagatcacatggcctacagatctgcatatttccca
gtgaaggatgtgattgatggtgatctctgtgagcagtatccagccctcccagctgatatg
cagaggaagattgccgatgagcttgaccgaactccaggtgaaatcctgaagaagctggaa
gacatcagaaacaaaatcatctag
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