Triticum dicoccoides (wild emmer wheat): 119322619
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Entry
119322619 CDS
T07278
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119322619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119322619
Enzymes [BR:
tdc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119322619
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
119322619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
Zn_ribbon_6
zf-RING_6
zf-RING_4
YEATS
Motif
Other DBs
NCBI-GeneID:
119322619
NCBI-ProteinID:
XP_037452002
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All DBs
Position
6B:complement(111393698..111399409)
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AA seq
311 aa
AA seq
DB search
MAPGSSIVSVTEVPESDCGDRGLSEALSSIRLDGDSTSKPSWAASLVNVGLSSLTGLNDL
LECPVCTNSMRPPILQCPNGHTICSSCKHRVDNHCPTCRQELGNIRCLALEKVAESIQLP
CKYQSLGCTEIHPYQNKLKHEELCRFRPYSCPYAGSECLIAGDVPMLVSHLINDHKVDLH
EGCTFNHRYVKSNPYEVENATWMLTVFKCFGQHFCLHFEAFLLGMSPVYMAFLRFMGEES
EARGFCYSLEVGGNGRKLTWQGTPRSIRDGHKKVRDSFDGLIIHRNMALFFSSGTRQELK
LRVTGRIWKEQ
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggctccaggaagcagcattgtgagtgtgactgaagtccctgagtcagattgtggcgac
cgtgggctctccgaggcactcagtagtattaggcttgatggagattctacaagtaagccc
tcctgggctgcgtcacttgtcaatgttggtttgtcatcattgactggcttgaatgatttg
ctcgagtgtccagtgtgtacaaactcaatgcggccacctatacttcagtgcccaaatggc
cacacaatttgctccagctgtaagcatagggtagacaaccattgccccacttgccgccag
gagctgggaaatatcagatgcttggctctcgagaaggtggccgaatcgattcagcttcca
tgcaaataccaaagcctgggctgcaccgagatccatccttaccagaacaaacttaagcat
gaggagctctgcaggttcaggccatacagctgtccatacgcaggttcagagtgcctgatt
gcaggtgacgttccgatgctcgtgtctcatctcatcaacgaccacaaggtggacttgcac
gaaggctgcaccttcaaccaccgctacgtgaagtccaacccttacgaagtggaaaacgcg
acatggatgctcactgtgttcaagtgttttggtcagcacttctgcctgcacttcgaggcg
ttcctgctgggtatgtccccagtgtacatggcgttcctgcggttcatgggggaggagagc
gaggctcggggcttctgctacagcctggaggtgggtgggaacgggcggaagctgacgtgg
cagggcacgccgcggagcatccgggacgggcacaagaaggtgcgggacagctttgacggg
ctcatcatccaccgcaacatggccctcttcttctccagcggcacccggcaggagctcaag
ctgcgcgtgaccggccgcatctggaaggagcagtga
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