Triticum dicoccoides (wild emmer wheat): 119322939
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Entry
119322939 CDS
T07278
Name
(RefSeq) prolycopene isomerase, chloroplastic-like
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00906
Carotenoid biosynthesis
tdc01100
Metabolic pathways
tdc01110
Biosynthesis of secondary metabolites
Module
tdc_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
119322939
Enzymes [BR:
tdc01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
119322939
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Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
HI0933_like
Thi4
GIDA
FAD_binding_3
Pyr_redox_2
GMC_oxred_N
Motif
Other DBs
NCBI-GeneID:
119322939
NCBI-ProteinID:
XP_037452381
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Position
1B:complement(125423075..125428446)
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AA seq
592 aa
AA seq
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MPLLFSPLTARCLHHSPRLPAPIAHHPSRPRPLGGETRGGTRGRRVAVVSERQAAAAVLA
AEKSPGGEGGDGERYDAIVVGSGIGGLVAATQLAAKGARVLVLEKYIIPGGSSGYYRRDG
FTFDVGSSVMFGFSDKGNLNLITQALEAVGCKMEVIPDPSTVHFHLPGALSVLVHREYND
FIEELVSKFPHEKEGILKFYGICWKIFNSLNSLELKSLEEPLYLFGQFFKKPLECLTLAY
YLPQNAGDIARKFIKDQQLLSFIDAECFIVSTVNALKTPMINASMVLCDRHFGGINYPVG
GVGGIAVSLANGLVEKGSAIRYKANVTNVILENGKAVGVRLSNGKELFARTVISNATRWD
TFGKLVKAEELPEEEKNFQKNYVKAPSFLSIHLGVKASVLPAGTDCHHFVLEDDWSNLEK
PYGSIFLSIPTVLDPSLAPEGHHILHIFTTAGIEDWEGLPRKDYEQKKELVANEIIRRLE
NKLFPGLQDSIVLKEVGSPKTHRRFLARNDGTYGPMPRGKPKGLLAMPFNTTSIDGLYCV
GDSCFPGQGVIAVAFSGVMCAHRVAADIDLEQRSPILDTGLLGVLRWLRTLA
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcctcttctcgcccctcacggcgcggtgcctccaccactccccgcgcctcccc
gcgcccatcgcgcaccacccctcccgcccccgtcctctcggcggcgagacccgcggaggt
accagggggaggagagtggcggtggtgtcggagaggcaggcggcggcggcggtgttggcc
gcggagaagtccccgggaggagagggaggcgacggagagcgatacgacgcgatagtggtc
gggtcggggatcgggggcctggtggcggcgacccagctggccgccaaaggggcgcgggtg
ctggtcctcgagaagtacatcatccccgggggcagctccgggtactaccgccgcgacggg
ttcaccttcgacgtcggctcctccgtcatgttcgggttctccgacaagggaaacttaaat
ttgataacacaagcactagaagcagttggatgtaagatggaagtcataccagacccttct
acggttcatttccatctacctggtgccctctccgttcttgtgcatagggagtataatgac
ttcattgaagagctggttagcaaattcccgcatgaaaaagaaggaatcctaaaattctat
ggcatatgttggaagatcttcaattcattaaattctttggaactaaagtccttggaagaa
cctctatacctattcgggcaattttttaagaagcctttggaatgcttgactctcgcatac
tatctgccacagaatgctggggatattgctcgcaagttcataaaagatcagcagttgcta
tccttcatagatgctgagtgttttattgtgagcacagtcaatgccttgaaaacacccatg
atcaacgcgagcatggtattgtgtgataggcactttggaggaattaactatccagttggt
ggtgttggtggtattgcggtgtctttggcaaatggccttgttgaaaagggcagcgcaata
cgttacaaggcgaatgtgaccaatgttattcttgaaaatgggaaagctgttggagtgagg
ttgtcaaatgggaaggagttattcgctagaacagtaatatcaaatgccacaagatgggac
acatttggaaaactcgtgaaggctgaagagcttccagaagaggagaaaaactttcagaag
aactatgttaaagcgccatcatttctatccattcatctgggtgtcaaagcctcagtttta
cctgctggtactgattgccaccattttgtactggaggatgactggtcgaacttggaaaag
ccttatggaagcatatttttaagtatccctacagttcttgatccatccttggctcctgaa
ggacatcacatacttcatatatttacaactgcaggtatagaagattgggagggtctacct
aggaaggattatgagcagaaaaaggagcttgtggcaaatgagatcatacgaagacttgaa
aataagttgtttcctggtcttcaagactcaatagtcctcaaggaggtaggatccccaaaa
actcaccgcagatttcttgcccgaaatgatggtacatatggacccatgccacggggtaaa
cccaagggtttgctggcaatgcctttcaataccacttcaatagatggactttactgcgtc
ggcgacagctgttttcctgggcaaggagtgattgctgtggcattttcaggggtcatgtgt
gctcatcgtgttgcagcagacatagatcttgaacaaaggtctcctattctagacacgggc
cttctcggtgtcctcagatggttgagaacactcgcataa
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