KEGG   Triticum dicoccoides (wild emmer wheat): 119323531
Entry
119323531         CDS       T07278                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119323531
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tdc03041]
    119323531
   03036 Chromosome and associated proteins [BR:tdc03036]
    119323531
Spliceosome [BR:tdc03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    119323531
 Complex B
    119323531
 Complex C
   U2 SnRNP specific factors
    119323531
Chromosome and associated proteins [BR:tdc03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    119323531
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_ECM29 HEAT_2 HEAT_EF3_N Htt_N-HEAT_1 Cnd1 XMAP215_CLASP_TOG Adaptin_N Vac14_Fab1_bd UME IFRD
Other DBs
NCBI-GeneID: 119323531
NCBI-ProteinID: XP_037453111
LinkDB
Position
6B:159431905..159437739
AA seq 1282 aa
MDGIDAELARAQDERRKLEEALAAGAPMAVSSVTFDKDLYGGGGSGSDRFAGYDTSIPAS
EDDAPEDDSAEPSAANPAVRRLASYTGHAVAAADIPRSEDDDGMPAKRSQRIIDREDDYR
RRRLDRIISPERHDAFASGEATPDPSVRTYADAMRESKVQQEKEHVLREIAKKKKEEEEK
AKEKKAAPQPQPAATKRRNRWDQSQDGDAAAGAKKSKTSDWDAPDATPGIGRWDATPGRV
GDATPSVRRNRWDETPTPGRMADADATPAAGGITPGATPSGAWDATPKLPGGLVTPTPKK
QRSRWDETPASMGSATPGGTAATPAGFNTPGQTPFGAENLATPTPGHLAARGPMTPEQYQ
LLRWERDIEERNRPLTDEELDSMFPQEGYKILEPPASYQPIRTPARKLLATPTPLGTPMY
AIPEENRGQHFDVPKDLGPGLPLMKPEDYQYFGTLLNEDEEEQLTPEEQKERKIMKLLLK
VKNGTPPQRKTALRQLTDKAREFGAGPLFNKILPLLMQPTLEDQERHLLVKVIDRVLYKL
DELVRPFVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEY
VRNTTARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILMGCAVLPHL
KNLVEIIEHGLSDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVL
AAFLKAIGFIIPLMDALYASYYTKEVMQVLIREFQSPDEEMKKIVLKVVKQCVSTEGVEA
DYIRSDILPDFFKHFWVRRMALDRRNYKQLVETTVEMANKVGVTGIVGKIVEDLKDESEP
YRRMVMETIEKVVANLGASDIDPRLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALG
QRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAIVMKQCQEEQLMGHLGVVLYEYL
GEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRI
ADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLK
VQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMG
KDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYIWPNIFET
SPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVA
SYPALGDDGDNIFSRPELAMFV
NT seq 3849 nt   +upstreamnt  +downstreamnt
atggacgggatcgacgcggagctcgcgcgcgcgcaggacgagcgccggaagttggaggag
gccctggcggccggcgcgcccatggccgtctcctccgtcaccttcgacaaggacctctac
ggcgggggcggctccggctccgaccggttcgccggctacgacacctccatcccggcctcc
gaggacgacgcgcccgaggacgacagcgccgagccctccgccgccaaccccgcggtgcgc
cggctcgcgtcctacacgggccacgccgtcgccgccgccgacatcccccgctcggaggac
gacgacgggatgcccgccaagagatcccagcgcatcattgaccgcgaggacgactaccgc
cgccgccgcctcgaccgcatcatctcgcccgagcgccacgacgccttcgcgtccggggag
gccaccccggacccctccgtccgaacctacgccgatgccatgcgcgagagcaaggtgcag
caggagaaggagcacgtgctgcgtgaaatcgctaagaagaagaaggaggaggaggagaag
gccaaggagaagaaggctgcgcctcagccgcagccagccgcgaccaaacggcgcaatagg
tgggatcagtcgcaggacggcgatgctgctgctggggccaagaagtccaagacctcagac
tgggatgcccctgatgcaactcctggtattgggcgctgggacgccactccaggccgtgtt
ggagatgcaacgccctctgtgaggaggaataggtgggatgagactccaactccagggagg
atggctgacgcagatgcaactcctgcagccggtggcattactccaggagccaccccttct
ggggcatgggatgctactcctaagctgcctggtgggcttgtcacaccaacacccaagaag
cagaggtcgaggtgggacgagacaccagcgagtatggggagcgcaacacctggtggtaca
gcagcgacacctgcagggttcaacactcctggacaaacaccattcggagcagagaacctt
gccacaccaacacctggccaccttgctgcccgtggcccgatgactcctgagcagtaccag
ctcttgcgatgggagcgggacattgaggagcggaacaggcctctcactgacgaggagctt
gactccatgtttccgcaggagggatacaagattcttgagcctccagcttcataccagccc
atacgtaccccagcaaggaagctgctcgctacgccaacacctctgggcacaccaatgtat
gctattccagaggagaaccgtggacagcactttgatgtgcccaaggacctgggtcctggt
ttgccactcatgaagccagaggactaccagtactttgggacgttgctgaatgaggacgag
gaggagcagctaacgccagaggagcagaaggaaagaaaaatcatgaagctcctgctcaag
gtaaagaatggcacacccccacagcggaagacagcactccggcagctcacggacaaagca
cgtgagtttggtgctggcccattgttcaacaaaatcctgccattgctcatgcagccaaca
cttgaggaccaggaacgtcatctcctggtgaaggtcattgacagggtgctgtataagctg
gatgagctggtccggccatttgtgcacaagattcttgttgttatcgagccacttttgatt
gatgaggattactatgctcgtgttgagggcagggagattatctcaaatcttagcaaagct
gctggtcttgctactatgattgctgccatgagacctgatattgataacatcgacgagtac
gtgaggaatacgactgccagggcattcagtgtggtggcttctgctttgggtatcccggcc
ctcctcccatttttaaaggctgtttgtcagagtaagaagtcctggcaagctcggcacact
ggtatcaagattgttcagcagattgctattctcatgggctgcgctgttctgcctcacctt
aagaacctagttgagatcattgagcatggtctaagcgatgagaaccagaaagtgcggacg
atcactgccctctctcttgctgcacttgctgaagctgctgcgccctacggtatagaaagt
tttgatagtgtcttgaagcctctctggaagggtatcagatctcaccgtggaaaggtcctt
gctgccttcttgaaggctattggtttcatcatccctcttatggatgctctgtatgccagt
tactacacgaaggaggtcatgcaagtcctgattagagagttccagtccccagatgaagag
atgaagaagattgtcctgaaggttgttaagcagtgtgtcagtacagagggtgtggaggct
gattatatccggagtgacatccttccagacttcttcaaacacttctgggttaggagaatg
gccctagatcgtaggaactataagcaacttgtggaaacaacagtagagatggcaaacaag
gtgggagttactggtattgttgggaagattgttgaggatctgaaagatgaaagtgagcct
tacaggagaatggtgatggaaacaattgaaaaggtggtggccaacttgggtgcctcggat
atcgatcctcgtttggaggagctgcttattgatggcatcctgtatgctttccaagagcag
acaagtgatgatgcaaatgtcatgcttaatggttttggagctgttgtgaatgcgctcggc
cagagggtcaagccttaccttcctcagatatgtggtaccattaagtggcggttgaacaat
aagagtgcgaaagttaggcagcaagctgctgatctgatctcaaggatagctattgttatg
aagcagtgccaggaggagcagcttatgggtcacctgggtgttgtgctatatgagtacttg
ggagaggagtatcctgaggtgctgggttcaattctcggagcattgaaggctatcgtgaat
gttattggtatgactaagatgacgcctccgatcaaggatctccttcctcgtctgactccc
atcttgaagaataggcatgagaaggtccaagagaactgcattgatctagttggtaggatt
gctgatcgtggagcagaatttgttccagctagggagtggatgaggatttgttttgagttg
ctggaaatgttgaaggctcacaagaagggtatcagaagagccactgtgaacacatttggt
tatattgccaaggcaattgggccacaggatgtgttggccactctgttgaacaacttgaag
gtgcaggagcgacagaaccgtgtctgcaccactgtagcaattgctattgttgctgaaact
tgctcgcctttcacagttttgcccgccctcatgaatgagtaccgagttccggagctaaat
gttcagaatggtgttttgaagtctctctcttttctatttgagtatattggtgagatgggc
aaagattacatatatgctgtcactcccttgctcgaagatgccctaatggacagggatctg
gttcacaggcagactgctgcatctgctgttaagcatatggctctgggagttgctggcttg
ggttgtgaggatgctcttgtccatttgcttaactatatctggcccaacatattcgagaca
tctccccatgttataaatgccgtcatggaggctattgaggggatgcgagttgctctaggt
gcagctgtggttctgaattattgcctccaaggccttttccatccagcaaggaaagtacgt
gaagtatattggaagatctataactctctgtatattggtgcacaagatgcacttgttgct
tcttatcctgcactgggcgatgatggagacaatatcttcagccgtccagagctagccatg
ttcgtgtga

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